Asymmetric nature of two subunits of RAD18, a RING-type ubiquitin ligase E3, in the human RAD6A–RAD18 ternary complex

作者: Yuji Masuda , Miki Suzuki , Hidehiko Kawai , Fumio Suzuki , Kenji Kamiya

DOI: 10.1093/NAR/GKR805

关键词: UbiquitinProtein subunitStereochemistryLigase activityProtein structureBiochemistryDNA ligaseBiologyUbiquitin-conjugating enzymeTernary complexUbiquitin ligase

摘要: RAD18, a RING-type ubiquitin ligase (E3) that plays an essential role in post-replication repair, possesses distinct domains named RING, UBZ, SAP and the RAD6-binding domain (R6BD) forms dimer. RAD6, ubiquitin-conjugating enzyme (E2), stably associates with R6BD C-terminal portion. In this study, we established method to distinguish between two subunits of RAD18 by introduction different tags, analyzed mutant complexes. Our results, surprisingly, demonstrate RAD6A form ternary complex, RAD6A-(RAD18)(2) presence only one is sufficient for complex formation activity. Interestingly, activity dimer lacking both R6BDs not restored even large amounts added solution, suggesting requirement precise juxtaposition via interaction R6BD. We further show mutations either RING or SAP, but strongly reduce activity, although inactivation without effect. These results suggest asymmetric nature complex.

参考文章(55)
Wolfram Siede, Graham C. Walker, Errol C. Friedberg, DNA Repair and Mutagenesis ,(2006)
F. William Studier, Alan H. Rosenberg, John J. Dunn, John W. Dubendorff, Use of T7 RNA polymerase to direct expression of cloned genes. Methods in Enzymology. ,vol. 185, pp. 60- 89 ,(1990) , 10.1016/0076-6879(90)85008-C
Peter S. Brzovic, Ponni Rajagopal, David W. Hoyt, Mary-Claire King, Rachel E. Klevit, Structure of a BRCA1-BARD1 heterodimeric RING-RING complex. Nature Structural & Molecular Biology. ,vol. 8, pp. 833- 837 ,(2001) , 10.1038/NSB1001-833
Frank Göhring, Birgit L Schwab, Pierluigi Nicotera, Marcel Leist, Frank O Fackelmayer, The novel SAR-binding domain of scaffold attachment factor A (SAF-A) is a target in apoptotic nuclear breakdown The EMBO Journal. ,vol. 16, pp. 7361- 7371 ,(1997) , 10.1093/EMBOJ/16.24.7361
Z. Zhuang, R. E. Johnson, L. Haracska, L. Prakash, S. Prakash, S. J. Benkovic, Regulation of polymerase exchange between Polη and Polδ by monoubiquitination of PCNA and the movement of DNA polymerase holoenzyme Proceedings of the National Academy of Sciences of the United States of America. ,vol. 105, pp. 5361- 5366 ,(2008) , 10.1073/PNAS.0801310105
Satoshi Tateishi, Yoshiyuki Sakuraba, Sadaharu Masuyama, Hirokazu Inoue, Masaru Yamaizumi, None, Dysfunction of human Rad18 results in defective postreplication repair and hypersensitivity to multiple mutagens Proceedings of the National Academy of Sciences of the United States of America. ,vol. 97, pp. 7927- 7932 ,(2000) , 10.1073/PNAS.97.14.7927
Yuji Masuda, Jinlian Piao, Kenji Kamiya, DNA Replication-Coupled PCNA Mono-Ubiquitination and Polymerase Switching in a Human In Vitro System Journal of Molecular Biology. ,vol. 396, pp. 487- 500 ,(2010) , 10.1016/J.JMB.2010.01.003
Jong Sook Ahn, Matthew C. Whitby, The role of the SAP motif in promoting Holliday junction binding and resolution by SpCCE1. Journal of Biological Chemistry. ,vol. 278, pp. 29121- 29129 ,(2003) , 10.1074/JBC.M302314200
Satoshi Nakajima, Li Lan, Shin-ichiro Kanno, Noriko Usami, Katsumi Kobayashi, Masahiko Mori, Tadahiro Shiomi, Akira Yasui, Replication-dependent and -independent Responses of RAD18 to DNA Damage in Human Cells Journal of Biological Chemistry. ,vol. 281, pp. 34687- 34695 ,(2006) , 10.1074/JBC.M605545200