Evaluating the performance of individual-based animal movement models in novel environments

作者: Katherine Shepard Watkins , Kenneth A. Rose

DOI: 10.1016/J.ECOLMODEL.2012.11.011

关键词: Computer scienceEcologyKinesisMovement (music)Artificial intelligenceGridGenetic algorithmPopulationQuality (business)Set (psychology)Machine learningCalibration (statistics)

摘要: Abstract Simulating animal movement in spatially explicit individual-based models (IBMs) is both challenging and critically important to accurately estimating population dynamics. A number of different approaches have been developed that make assumptions about how individuals move their environment use mathematics translate cues into a behavioral response. Properly calibrated should produce realistic conditions encountered during calibration novel conditions; however, most studies date not tested conditions. We compared four distinct or sub-models (restricted-area search, kinesis, event-based, run tumble) using an IBM loosely based on small pelagic fish (e.g. Engraulidae) simulated growth, mortality, cohort 2-dimensional grid. trained the with genetic algorithm one set environmental then them other three environments. The generally performed well environments, except restricted-area search event-based needed be environments gradients similar test environment. Also, tumble produced near-random distributions all training steepest habitat quality gradient, it random In selecting sub-model, researchers consider potential sub-models, observed patterns species interest, shape steepness underlying gradient.

参考文章(37)
A. J. F. Van Rooij, R. P. Johnson, L. C. Jain, Neural Network Training Using Genetic Algorithms ,(1996)
Dali Wang, Michael W. Berry, Louis J. Gross, A parallel structured ecological model for high end shared memory computers international workshop on openmp. pp. 107- 118 ,(2005) , 10.1007/978-3-540-68555-5_9
Heather L. Haas, Kenneth A. Rose, Brian Fry, Thomas J. Minello, Lawrence P. Rozas, BROWN SHRIMP ON THE EDGE: LINKING HABITAT TO SURVIVAL USING AN INDIVIDUAL-BASED SIMULATION MODEL Ecological Applications. ,vol. 14, pp. 1232- 1247 ,(2004) , 10.1890/03-5101
Thomas Mueller, William F. Fagan, Volker Grimm, Integrating individual search and navigation behaviors in mechanistic movement models Theoretical Ecology. ,vol. 4, pp. 341- 355 ,(2011) , 10.1007/S12080-010-0081-1
Benjamin H. Letcher, Jeffery A. Priddy, Jeffrey R. Walters, Larry B. Crowder, An individual-based, spatially-explicit simulation model of the population dynamics of the endangered red-cockaded woodpecker, Picoides borealis Biological Conservation. ,vol. 86, pp. 1- 14 ,(1998) , 10.1016/S0006-3207(98)00019-6
Mary M. Conner, Michael R. Ebinger, Frederick F. Knowlton, Evaluating coyote management strategies using a spatially explicit, individual-based, socially structured population model Ecological Modelling. ,vol. 219, pp. 234- 247 ,(2008) , 10.1016/J.ECOLMODEL.2008.09.008
Robert Humston, Donald B. Olson, Jerald S. Ault, Behavioral Assumptions in Models of Fish Movement and Their Influence on Population Dynamics Transactions of The American Fisheries Society. ,vol. 133, pp. 1304- 1328 ,(2004) , 10.1577/T03-040.1