Host factors that affect Ty3 retrotransposition in Saccharomyces cerevisiae

作者: Michael Aye , Becky Irwin , Nadejda Beliakova-Bethell , Eric Chen , Jennifer Garrus

DOI: 10.1534/GENETICS.104.028126

关键词: ChromatinTransfer RNAGeneGeneticsBiologyMutantRNA polymerase IIITranscription (biology)Complementary DNASaccharomyces cerevisiae

摘要: The retrovirus-like element Ty3 of Saccharomyces cerevisiae integrates at the transcription initiation region RNA polymerase III. To identify host genes that affect transposition, a collection insertion mutants was screened using genetic assay in which activates expression tRNA suppressor. Fifty-three loci were identified this screen. Corresponding knockout tested for ability to mobilize galactose-inducible Ty3, marked with HIS3 gene. Of 42 tested, 22 had phenotypes similar those displayed original assay. proteins encoded by defective are involved chromatin dynamics, transcription, processing, protein modification, cell cycle regulation, nuclear import, and unknown functions. These induced assayed Gag3p protein, integrase, cDNA, integration upstream chromosomal tDNAVal(AAC) genes. Most differences from wild type one or more intermediates, although these typically not as severe defect. Because relatively large number affecting retrotransposition can be yeast because majority have mammalian homologs, approach provides an avenue identification potential antiviral targets.

参考文章(103)
V W Bilanchone, P T Kinsey, J A Claypool, S B Sandmeyer, Positive and negative regulatory elements control expression of the yeast retrotransposon Ty3. Genetics. ,vol. 134, pp. 685- 700 ,(1993) , 10.1093/GENETICS/134.3.685
Michael Aye, Suzanne B. Sandmeyer, Ty3 requires yeast La homologous protein for wild-type frequencies of transposition. Molecular Microbiology. ,vol. 49, pp. 501- 515 ,(2003) , 10.1046/J.1365-2958.2003.03568.X
J. D. Dvorin, M. H. Malim, Intracellular Trafficking of HIV-1 Cores: Journey to the Center of the Cell Current Topics in Microbiology and Immunology. ,vol. 281, pp. 179- 208 ,(2003) , 10.1007/978-3-642-19012-4_5
Jin M. Kim, Swathi Vanguri, Jef D. Boeke, Abram Gabriel, Daniel F. Voytas, Transposable Elements and Genome Organization: A Comprehensive Survey of Retrotransposons Revealed by the Complete Saccharomyces cerevisiae Genome Sequence Genome Research. ,vol. 8, pp. 464- 478 ,(1998) , 10.1101/GR.8.5.464
Assen Roguev, Daniel Schaft, Anna Shevchenko, WWM Pim Pijnappel, Matthias Wilm, Rein Aasland, A Francis Stewart, The Saccharomyces cerevisiae Set1 complex includes an Ash2 homologue and methylates histone 3 lysine 4 The EMBO Journal. ,vol. 20, pp. 7137- 7148 ,(2001) , 10.1093/EMBOJ/20.24.7137
Steve Best, Paul R. Le Tissier, Jonathan P. Stoye, Endogenous retroviruses and the evolution of resistance to retroviral infection Trends in Microbiology. ,vol. 5, pp. 313- 318 ,(1997) , 10.1016/S0966-842X(97)01086-X
H Ito, Y Fukuda, K Murata, A Kimura, Transformation of intact yeast cells treated with alkali cations. Journal of Bacteriology. ,vol. 153, pp. 163- 168 ,(1983) , 10.1128/JB.153.1.163-168.1983
Evdokia K. Kastanos, Yakov Y. Woldman, Dean R. Appling, Role of mitochondrial and cytoplasmic serine hydroxymethyltransferase isozymes in de Novo purine synthesis in Saccharomyces cerevisiae Biochemistry. ,vol. 36, pp. 14956- 14964 ,(1997) , 10.1021/BI971610N