Epigenetic silencing of CHD5, a novel tumor‐suppressor gene, occurs in early colorectal cancer stages

作者: Mehrnaz Fatemi , Thomas A. Paul , Garrett M. Brodeur , Babak Shokrani , Hassan Brim

DOI: 10.1002/CNCR.28316

关键词: BiologyCancer researchEpigenetics of physical exerciseChromatin remodelingBisulfite sequencingEpigenomicsCancer epigeneticsMolecular biologyHistoneMethylationDNA methylation

摘要: BACKGROUND Chromodomain helicase DNA binding protein 5 (CHD5) is a family member of chromatin remodeling factors. The epigenetic silencing mechanisms CHD5 in colorectal cancer have not been well studied. METHODS Here we analyzed methylation and mRNA expression vitro clinical samples from African American patients. RNA were isolated formalin fixed paraffin embedded (FFPE) colon tissues. was tested for using methylation-specific polymerase chain reation (PCR) bisulfite sequencing. used quantification qRT-PCR. RKO cell line treated with 5-Aza-dC SAHA. cells also stably transfected CHD5-expressing vector. transcriptional activity studied the 1 kb upstream region promoter dual reporter assay. We performed proliferation, migration, invasion assays line. RESULTS In most adenoma samples, detected contrast to normal In cells, associated repressive histone modifications. restored after treatment reactivation reduced invasion. assay indicated that main regulatory encompassed −489 −823 important sites (TCF/LEF, SP1, AP-2). CONCLUSIONS The gene repressed all types adenomas, either epigenetically or by chromosomal deletion. regulated likely acts as tumor-suppressor early carcinogenesis. Cancer 2014;120:172–180. © 2013 Society.

参考文章(39)
Manel Esteller, Cancer Epigenetics: Dna Methylation and Chromatin Alterations in Human Cancer Advances in Experimental Medicine and Biology. ,vol. 532, pp. 39- 49 ,(2003) , 10.1007/978-1-4615-0081-0_5
Kylie L. Gorringe, David Y.H. Choong, Louise H. Williams, Manasa Ramakrishna, Anita Sridhar, Wen Qiu, Jennifer L. Bearfoot, Ian G. Campbell, Mutation and methylation analysis of the chromodomain-helicase-DNA binding 5 gene in ovarian cancer. Neoplasia. ,vol. 10, pp. 1253- 1258 ,(2008) , 10.1593/NEO.08718
Jeroen Roose, Miranda Molenaar, Josi Peterson, Jolanda Hurenkamp, Helen Brantjes, Petra Moerer, Marc van de Wetering, Olivier Destrée, Hans Clevers, The Xenopus Wnt effector XTcf-3 interacts with Groucho-related transcriptional repressors Nature. ,vol. 395, pp. 608- 612 ,(1998) , 10.1038/26989
A. Bagchi, A. A. Mills, The quest for the 1p36 tumor suppressor. Cancer Research. ,vol. 68, pp. 2551- 2556 ,(2008) , 10.1158/0008-5472.CAN-07-2095
Raymond R.Y. Wong, Loucia K.Y. Chan, Teresa P.T. Tsang, Coral W.S. Lee, T.H. Cheung, S.F. Yim, Nelson S.S. Siu, Sophia N.C. Lee, M.Y. Yu, Stephen S.C. Chim, Y.F. Wong, Tony K.H. Chung, CHD5 Downregulation Associated with Poor Prognosis in Epithelial Ovarian Cancer Gynecologic and Obstetric Investigation. ,vol. 72, pp. 203- 207 ,(2011) , 10.1159/000323883
Hans Clevers, Roel Nusse, Wnt/β-catenin signaling and disease. Cell. ,vol. 149, pp. 1192- 1205 ,(2012) , 10.1016/J.CELL.2012.05.012
Femke Simmer, Arie B. Brinkman, Yassen Assenov, Filomena Matarese, Anita Kaan, Lina Sabatino, Alberto Villanueva, Dori Huertas, Manel Esteller, Thomas Lengauer, Christoph Bock, Vittorio Colantuoni, Lucia Altucci, Hendrik G. Stunnenberg, Comparative Genome-wide DNA Methylation Analysis of Colorectal Tumor and Matched Normal Tissues Epigenetics. ,vol. 7, pp. 1355- 1367 ,(2012) , 10.4161/EPI.22562
Chunxiao Cai, Hassan Ashktorab, Xiaowu Pang, Yuan Zhao, Wei Sha, Yulan Liu, Xinbin Gu, MicroRNA-211 Expression Promotes Colorectal Cancer Cell Growth In Vitro and In Vivo by Targeting Tumor Suppressor CHD5 PLoS ONE. ,vol. 7, pp. e29750- ,(2012) , 10.1371/JOURNAL.PONE.0029750
Pooneh Mokarram, Krishan Kumar, Hassan Brim, Fakhraddin Naghibalhossaini, Mehdi Saberi-firoozi, Mehdi Nouraie, Robert Green, Ed Lee, Duane T. Smoot, Hassan Ashktorab, Distinct High-Profile Methylated Genes in Colorectal Cancer PLoS ONE. ,vol. 4, pp. e7012- ,(2009) , 10.1371/JOURNAL.PONE.0007012
A Formosa, A M Lena, E K Markert, S Cortelli, R Miano, A Mauriello, N Croce, J Vandesompele, P Mestdagh, E Finazzi-Agrò, A J Levine, G Melino, S Bernardini, E Candi, DNA methylation silences miR-132 in prostate cancer Oncogene. ,vol. 32, pp. 127- 134 ,(2013) , 10.1038/ONC.2012.14