Molecular diagnostics of lung cancer in the clinic.

作者: Lynette Sholl

DOI: 10.21037/TLCR.2017.08.03

关键词: OncologyROS1AdenocarcinomaBiopsyGenotypingEpidermal growth factor receptorMedicineLung cancerMolecular diagnosticsImmunotherapyInternal medicineBioinformatics

摘要: According to current practice guidelines, all patients with advanced non-small cell lung cancer (NSCLC) should undergo predictive biomarker testing. For squamous carcinoma patients, PD-L1 immunohistochemistry is indicated select for immunotherapy in the first line. adenocarcinoma, disease testing epidermal growth factor receptor (EGFR) mutations, ALK and ROS1 rearrangements, expression predict response EGFR, ALK, or targeted inhibitors immunotherapy, respectively. Besides these, a number of other biomarkers are under clinical investigation as predictors therapies, including BRAF, ERBB2, MET splice mutations amplification, RET rearrangements. Successful this complex array molecular targets demands careful coordination between proceduralists, pathologists laboratories ensure proper tumor tissue handling following biopsy well judicious use diagnostic immunohistochemistry. Even so, sample failure rates due inadequate high practice, particularly when using sequential methods. Use next generation sequencing (NGS) can enable detection multiple alteration types (mutation, gene copy change, rearrangement) simultaneously even small amounts input nucleic acids, thus increasing success rates. In an established diagnosis but prohibitively limited who experiencing relapse, analyses circulating DNA (ctDNA) from plasma serve alternate substrate, however more sensitivity approach must be taken into account. This review will explore indications pitfalls routine NGS genotyping clinic, intersection these technologies.

参考文章(66)
, A genomics-based classification of human lung tumors Science Translational Medicine. ,vol. 5, pp. 1- 28 ,(2013) , 10.1126/SCITRANSLMED.3006802
Scott V Bratman, Aaron M Newman, Ash A Alizadeh, Maximilian Diehn, Potential clinical utility of ultrasensitive circulating tumor DNA detection with CAPP-Seq. Expert Review of Molecular Diagnostics. ,vol. 15, pp. 715- 719 ,(2015) , 10.1586/14737159.2015.1019476
Sreenath V. Sharma, Daphne W. Bell, Jeffrey Settleman, Daniel A. Haber, Epidermal growth factor receptor mutations in lung cancer Nature Reviews Cancer. ,vol. 7, pp. 169- 181 ,(2007) , 10.1038/NRC2088
Neal I. Lindeman, Philip T. Cagle, Mary Beth Beasley, Dhananjay Arun Chitale, Sanja Dacic, Giuseppe Giaccone, Robert Brian Jenkins, David J. Kwiatkowski, Juan-Sebastian Saldivar, Jeremy Squire, Erik Thunnissen, Marc Ladanyi, Molecular Testing Guideline for Selection of Lung Cancer Patients for EGFR and ALK Tyrosine Kinase Inhibitors: Guideline from the College of American Pathologists, International Association for the Study of Lung Cancer, and Association for Molecular Pathology Journal of Thoracic Oncology. ,vol. 8, pp. 823- 859 ,(2013) , 10.1097/JTO.0B013E318290868F
L. V. Sequist, B. A. Waltman, D. Dias-Santagata, S. Digumarthy, A. B. Turke, P. Fidias, K. Bergethon, A. T. Shaw, S. Gettinger, A. K. Cosper, S. Akhavanfard, R. S. Heist, J. Temel, J. G. Christensen, J. C. Wain, T. J. Lynch, K. Vernovsky, E. J. Mark, M. Lanuti, A. J. Iafrate, M. Mino-Kenudson, J. A. Engelman, Genotypic and Histological Evolution of Lung Cancers Acquiring Resistance to EGFR Inhibitors Science Translational Medicine. ,vol. 3, ,(2011) , 10.1126/SCITRANSLMED.3002003
Aaron M Newman, Scott V Bratman, Jacqueline To, Jacob F Wynne, Neville C W Eclov, Leslie A Modlin, Chih Long Liu, Joel W Neal, Heather A Wakelee, Robert E Merritt, Joseph B Shrager, Billy W Loo, Ash A Alizadeh, Maximilian Diehn, An ultrasensitive method for quantitating circulating tumor DNA with broad patient coverage Nature Medicine. ,vol. 20, pp. 548- 554 ,(2014) , 10.1038/NM.3519
Alice T. Shaw, Sai-Hong I. Ou, Yung-Jue Bang, D. Ross Camidge, Benjamin J. Solomon, Ravi Salgia, Gregory J. Riely, Marileila Varella-Garcia, Geoffrey I. Shapiro, Daniel B. Costa, Robert C. Doebele, Long Phi Le, Zongli Zheng, Weiwei Tan, Patricia Stephenson, S. Martin Shreeve, Lesley M. Tye, James G. Christensen, Keith D. Wilner, Jeffrey W. Clark, A. John Iafrate, Crizotinib in ROS1-Rearranged Non–Small-Cell Lung Cancer The New England Journal of Medicine. ,vol. 371, pp. 1963- 1971 ,(2014) , 10.1056/NEJMOA1406766
Lynette M Sholl, Dara L Aisner, Marileila Varella-Garcia, Lynne D Berry, Dora Dias-Santagata, Ignacio I Wistuba, Heidi Chen, Junya Fujimoto, Kelly Kugler, Wilbur A Franklin, A John Iafrate, Marc Ladanyi, Mark G Kris, Bruce E Johnson, Paul A Bunn, John D Minna, David J Kwiatkowski, LCMC Investigators, None, Multi-institutional oncogenic driver mutation analysis in lung adenocarcinoma: The lung cancer mutation consortium experience Journal of Thoracic Oncology. ,vol. 10, pp. 768- 777 ,(2015) , 10.1097/JTO.0000000000000516
J. De Grève, E. Teugels, C. Geers, L. Decoster, D. Galdermans, J. De Mey, H. Everaert, I. Umelo, P. In’t Veld, D. Schallier, Clinical activity of afatinib (BIBW 2992) in patients with lung adenocarcinoma with mutations in the kinase domain of HER2/neu Lung Cancer. ,vol. 76, pp. 123- 127 ,(2012) , 10.1016/J.LUNGCAN.2012.01.008
Jason M. Rizzo, Michael J. Buck, Key Principles and Clinical Applications of “Next-Generation” DNA Sequencing Cancer Prevention Research. ,vol. 5, pp. 887- 900 ,(2012) , 10.1158/1940-6207.CAPR-11-0432