Assessment of genome origins and genetic diversity in the genus Eleusine with DNA markers.

作者: Shanmukhaswami S. Salimath , Antonio C. de Oliveira , Jeffrey L. Bennetzen , Ian D. Godwin

DOI: 10.1139/G95-096

关键词: Genetic diversityEleusineBotanyRestriction fragment length polymorphismDNA sequencingBiologyMicrosatelliteGenetic markerGeneticsRAPDGenetic variation

摘要: Finger millet (Eleusine coracana), an allotetraploid cereal, is widely cultivated in the arid and semiarid regions of world. Three DNA marker techniques, restriction fragment length polymorphism (RFLP), randomly amplified polymorphic (RAPD), inter simple sequence repeat amplification (ISSR), were employed to analyze 22 accessions belonging 5 species Eleusine. An 8 probe--3 enzyme RFLP combination, 18 RAPD primers, 6 ISSR respectively, revealed 14, 10, 26% 17 E. coracana from Africa Asia. These results indicated a very low level variability finger millets but did allow each line be distinguished. The different Eleusine could easily identified by technology 16% intraspecific exhibited two analyzed floccifolia suggested much higher diversity this than coracana. Between species, indica shared most markers, while tristachya considerable number indicating that these three form close genetic assemblage within compressa found divergent among examined. Comparison RFLP, RAPD, technologies, terms quantity quality data output, ISSRs are particularly promising for analysis plant genome diversity.

参考文章(28)
S. S. Salimath, S. C. Hiremath, Quantitative nuclear DNA changes in Eleusine ( Gramineae ) Plant Systematics and Evolution. ,vol. 178, pp. 225- 233 ,(1991) , 10.1007/BF00937965
M.S. CHENNAVEERAIAH, S.C. HIREMATH, Cytogenetics of minor millets. Developments in Plant Genetics and Breeding. ,vol. 2, pp. 613- 627 ,(1991) , 10.1016/B978-0-444-88259-2.50034-5
Andrew H. Paterson, Steven D. Tanksley, Mark E. Sorrells, DNA Markers in Plant Improvement Advances in Agronomy. ,vol. 46, pp. 39- 90 ,(1991) , 10.1016/S0065-2113(08)60578-7
Rick Kesseli, Oswaldo Ochoa, Richard Michelmore, Variation at RFLP loci in Lactuca spp. and origin of cultivated lettuce (L. sativa) Genome. ,vol. 34, pp. 430- 436 ,(1991) , 10.1139/G91-065
Maria Rita Micheli, Rodolfo Bova, Esterina Pascale, Ettore D'Ambrosio, Reproducible DNA fingerprinting with the random amplified polymorphic DNA (RAPD) method Nucleic Acids Research. ,vol. 22, pp. 1921- 1922 ,(1994) , 10.1093/NAR/22.10.1921
Juan Manuel González, Esther Ferrer, Random amplified polymorphic DNA analysis in Hordeum species. Genome. ,vol. 36, pp. 1029- 1031 ,(1993) , 10.1139/G93-137
C. Jung, K. Pillen, L. Frese, S. F�hr, A. E. Melchinger, Phylogenetic relationships between cultivated and wild species of the genusBeta revealed by DNA "fingerprinting". Theoretical and Applied Genetics. ,vol. 86, pp. 449- 457 ,(1993) , 10.1007/BF00838560
Tracy Halward, Tom Stalker, Elizabeth LaRue, Gary Kochert, Use of single-primer DNA amplifications in genetic studies of peanut (Arachis hypogaea L.). Plant Molecular Biology. ,vol. 18, pp. 315- 325 ,(1992) , 10.1007/BF00034958