The mitochondrial genome of the butterfly Papilio xuthus (Lepidoptera: Papilionidae) and related phylogenetic analyses

作者: Xia Feng , Dian-Feng Liu , Nai-Xin Wang , Chao-Dong Zhu , Guo-Fang Jiang

DOI: 10.1007/S11033-010-0044-Z

关键词: Evolutionary biologyBotanyMolecular phylogeneticsPyraloideaSister groupBombycoideaPhylogenetic treePapilionoideaPhylogeneticsPapilio xuthusBiologyGeneticsMolecular biologyGeneral Medicine

摘要: The nearly complete mitochondrial genome of the butterfly Papilio xuthus (Lepidoptera: Papilionidae) was sequenced for its nucleotide sequence 13,964 bp. has a typical gene order identical to other lepidopteran species. All tRNAs showed same stable canonical clover-leaf structure as those insects, except tRNASer (AGN), in which dihydrouracil arm (DHU arm) could not form stem–loop structure. Anomalous initiation codons have been observed cox1 gene, where ATTACG hexa-nucleotide believed be involved signaling. Twelve protein-coding data were used infer phylogenetic relationships among insect orders. Even though number orders represented by genomes is still limited, several well-established are evident analysis sequences. Monophyly Homometabola supported this paper. Phylogenetic analyses available species Bombycoidea, Pyraloidea, Papilionoidea and Tortricidea bolstered current morphology-based hypothesis that Pyraloidea monophyletic (Obtectomera). Bombycoidea (Bombyx mandarina Antheraea pernyi) (P. Coreana raphaelis) formed sister group.

参考文章(82)
M. Nei, R. K. Koehn, Evolution of genes and proteins. Sinauer Associates, Inc.. ,(1983)
David R. Wolstenholme, Animal mitochondrial DNA: structure and evolution. International Review of Cytology-a Survey of Cell Biology. ,vol. 141, pp. 173- 216 ,(1992) , 10.1016/S0074-7696(08)62066-5
Jeffrey L. Boore, Dennis V. Lavrov, Wesley M. Brown, Gene translocation links insects and crustaceans Nature. ,vol. 392, pp. 667- 668 ,(1998) , 10.1038/33577
W. M. Brown, M. George, A. C. Wilson, Rapid evolution of animal mitochondrial DNA. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 76, pp. 1967- 1971 ,(1979) , 10.1073/PNAS.76.4.1967
Ling Yang, Zhao-Jun Wei, Gui-Yun Hong, Shao-Tong Jiang, Long-Ping Wen, The complete nucleotide sequence of the mitochondrial genome of Phthonandria atrilineata (Lepidoptera: Geometridae) Molecular Biology Reports. ,vol. 36, pp. 1441- 1449 ,(2009) , 10.1007/S11033-008-9334-0
Peter G. Foster, Donal A. Hickey, Compositional bias may affect both DNA-based and protein-based phylogenetic reconstructions. Journal of Molecular Evolution. ,vol. 48, pp. 284- 290 ,(1999) , 10.1007/PL00006471
Zhijun Zhou, Yuan Huang, Fuming Shi, Haiyan Ye, The complete mitochondrial genome of Deracantha onos (Orthoptera: Bradyporidae) Molecular Biology Reports. ,vol. 36, pp. 7- 12 ,(2009) , 10.1007/S11033-007-9145-8
Douglas O. Clary, David R. Wolstenholme, The mitochondrial DNA molecule of Drosophila yakuba : nucleotide sequence, gene organization, and genetic code Journal of Molecular Evolution. ,vol. 22, pp. 252- 271 ,(1985) , 10.1007/BF02099755