Microarray analysis of hepatotoxins in vitro reveals a correlation between gene expression profiles and mechanisms of toxicity.

作者: Jeffrey F. Waring , Rita Ciurlionis , Robert A. Jolly , Matthew Heindel , Roger G. Ulrich

DOI: 10.1016/S0378-4274(01)00267-3

关键词: GeneMicroarray analysis techniquesBiologyGeneticsBiochemistryMicroarrayGene chip analysisMethapyrileneGene expressionIn vivoGene expression profiling

摘要: A rate-limiting step that occurs in the drug discovery process is toxicological evaluation of new compounds. New techniques use small amounts experimental compound and provide a high degree predictivity would greatly improve this process. The field microarray technology, which allows one to monitor thousands gene expression changes simultaneously, rapidly advancing already being applied numerous areas toxicology. However, it remains be determined if compounds with similar toxic mechanisms produce transcriptional expression. In addition, must caused by an agent vitro reflect those produced vivo. order address these questions, we treated rat hepatocytes 15 known hepatoxins (carbon tetrachloride, allyl alcohol, aroclor 1254, methotrexate, diquat, carbamazepine, methapyrilene, arsenic, diethylnitrosamine, monocrotaline, dimethyl-formamide, amiodarone, indomethacin, etoposide, 3-methylcholanthrene) used technology characterize based on changes. Our results showed expressional profiles for indeed formed clusters, suggesting effect transcription. There was not complete identity, however, indicating each unique signature. These show large-scale analysis using has promise as diagnostic tool

参考文章(41)
Sachiko Fukumi, Junko Horiguchi-Yamada, Shuji Nakada, Makoto Nagari, Tsuneya Ohno, Hisashi Yamada, Differential responses of Bcl-2 family genes to etoposide in chronic myeloid leukemia K562 cells. Molecular and Cellular Biochemistry. ,vol. 206, pp. 43- 50 ,(2000) , 10.1023/A:1007056727876
Miriam Falzon, A. S. Milton, M. D. Burke, P. H. Whiting, S. W B Ewen, Comparative effects of indomethacin on hepatic enzymes and histology and on serum indices of liver and kidney function in the rat. British journal of experimental pathology. ,vol. 66, pp. 527- 534 ,(1985)
Glover E, Poland A, Knutson J, Studies on the mechanism of action of halogenated aromatic hydrocarbons. Clinical physiology and biochemistry. ,vol. 3, pp. 147- 154 ,(1985)
P.O. Seglen, Preparation of rat liver cells. III. Enzymatic requirements for tissue dispersion Experimental Cell Research. ,vol. 82, pp. 391- 398 ,(1973) , 10.1016/0014-4827(73)90357-1
F M Carpanini, K R Butterworth, P Grasso, D Dunnington, D Pelling, The productoin of periportal necrosis by allyl alcohol in the rat [proceedings] British Journal of Pharmacology. ,vol. 63, ,(1978)
WeiWei Li, Jianguo Fan, Debabrata Banerjee, Joseph R. Bertino, Overexpression of p21waf1 Decreases G2-M Arrest and Apoptosis Induced by Paclitaxel in Human Sarcoma Cells Lacking Both p53 and Functional Rb Protein Molecular Pharmacology. ,vol. 55, pp. 1088- 1093 ,(1999) , 10.1124/MOL.55.6.1088
R. Philip Custer, Marian Freeman-Narrod, Stuart A. Narrod, Hepatotoxicity in Wistar Rats Following Chronic Methotrexate Administration: A Model of Human Reaction2 JNCI: Journal of the National Cancer Institute. ,vol. 58, pp. 1011- 1017 ,(1977) , 10.1093/JNCI/58.4.1011
Stephen Safe, Stelvio Bandiera, Tom Sawyer, Larry Robertson, Lorna Safe, Andrew Parkinson, Paul E. Thomas, Dene E. Ryan, Linda M. Reik, Wayne Levin, Mary Anne Denomme, Toshio Fujita, PCBs: structure-function relationships and mechanism of action. Environmental Health Perspectives. ,vol. 60, pp. 47- 56 ,(1985) , 10.2307/3429944
Gurpreet S Ratra, Winston A Morgan, Jenny Mullervy, Christopher J Powell, Matthew C Wright, Methapyrilene hepatotoxicity is associated with oxidative stress, mitochondrial disfunction and is prevented by the Ca2+ channel blocker verapamil Toxicology. ,vol. 130, pp. 79- 93 ,(1998) , 10.1016/S0300-483X(98)00096-1