Double RNA Interference of DNMT3b and DNMT1 Enhances DNA Demethylation and Gene Reactivation

作者: Yu Wei Leu , Farahnaz Rahmatpanah , Pearlly S. Yan , Joseph C. Liu , Susan H. Wei

DOI:

关键词: BiologyRNA-Directed DNA MethylationEpigeneticsDNA methylationDNA demethylationEpigenetics of physical exerciseDNA methyltransferaseMolecular biologyMethylationTrans-acting siRNA

摘要: Small interfering RNAs (siRNAs) are newly identified molecules shown to silence genes via targeted mRNA degradation. In this study, we used specific siRNAs as a tool probe the relationship between two DNA methyltransferase genes, DNMT3b and DNMT1 , in maintenance of methylation patterns genome. Levels or mRNAs proteins were markedly decreased (up 80%) on transfecting these into ovarian cancer cell line CP70. The resulting RNA interference showed differential effects demethylation gene reactivation treated cells. siRNA treatment led partial removal from three inactive promoter CpG islands, TWIST RASSF1A HIN-1 restored expression genes. This epigenetic alteration appeared less effective cells transfected with siRNA. However, combined greatly enhanced effect, producing 7–15-fold increases their expression. We also microarray approach examine 8640 island loci CP70 had greater effect 241 methylated selected repetitive sequences than that single treatment. Our data thus suggest whereas plays key role maintenance, DNMT 3b may act an accessory support function study shows is powerful for interrogating mechanisms normal pathological genomes.

参考文章(22)
Michael R. Rountree, Kurtis E. Bachman, Stephen B. Baylin, DNMT1 binds HDAC2 and a new co-repressor, DMAP1, to form a complex at replication foci Nature Genetics. ,vol. 25, pp. 269- 277 ,(2000) , 10.1038/77023
Peter A. Jones, Stephen B. Baylin, The fundamental role of epigenetic events in cancer Nature Reviews Genetics. ,vol. 3, pp. 415- 428 ,(2002) , 10.1038/NRG816
Ina Rhee, Kam-Wing Jair, Ray-Whay Chiu Yen, Christoph Lengauer, James G. Herman, Kenneth W. Kinzler, Bert Vogelstein, Stephen B. Baylin, Kornel E. Schuebel, CpG methylation is maintained in human cancer cells lacking DNMT1 Nature. ,vol. 404, pp. 1003- 1007 ,(2000) , 10.1038/35010000
François Fuks, Wendy A. Burgers, Alexander Brehm, Luke Hughes-Davies, Tony Kouzarides, DNA methyltransferase Dnmt1 associates with histone deacetylase activity. Nature Genetics. ,vol. 24, pp. 88- 91 ,(2000) , 10.1038/71750
Mehrnaz Fatemi, Andrea Hermann, Humaira Gowher, Albert Jeltsch, Dnmt3a and Dnmt1 functionally cooperate during de novo methylation of DNA FEBS Journal. ,vol. 269, pp. 4981- 4984 ,(2002) , 10.1046/J.1432-1033.2002.03198.X
Sayda M. Elbashir, Jens Harborth, Winfried Lendeckel, Abdullah Yalcin, Klaus Weber, Thomas Tuschl, Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells Nature. ,vol. 411, pp. 494- 498 ,(2001) , 10.1038/35078107
I. E. Krop, D. Sgroi, D. A. Porter, K. L. Lunetta, R. LeVangie, P. Seth, C. M. Kaelin, E. Rhei, M. Bosenberg, S. Schnitt, J. R. Marks, Z. Pagon, D. Belina, J. Razumovic, K. Polyak, HIN-1, a putative cytokine highly expressed in normal but not cancerous mammary epithelial cells Proceedings of the National Academy of Sciences of the United States of America. ,vol. 98, pp. 9796- 9801 ,(2001) , 10.1073/PNAS.171138398
Marie-France Robert, Steves Morin, Normand Beaulieu, France Gauthier, Ian C. Chute, Annie Barsalou, A. Robert MacLeod, DNMT1 is required to maintain CpG methylation and aberrant gene silencing in human cancer cells. Nature Genetics. ,vol. 33, pp. 61- 65 ,(2003) , 10.1038/NG1068
Masaki Okano, Daphne W Bell, Daniel A Haber, En Li, DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development. Cell. ,vol. 99, pp. 247- 257 ,(1999) , 10.1016/S0092-8674(00)81656-6
Kurtis E. Bachman, Michael R. Rountree, Stephen B. Baylin, Dnmt3a and Dnmt3b Are Transcriptional Repressors That Exhibit Unique Localization Properties to Heterochromatin Journal of Biological Chemistry. ,vol. 276, pp. 32282- 32287 ,(2001) , 10.1074/JBC.M104661200