Prognostic Genes in the Tumor Microenvironment in Cervical Squamous Cell Carcinoma

作者: Xin-Bin Pan , Yan Lu , Jian-Li Huang , Ying Long , De-Sheng Yao

DOI: 10.18632/AGING.102429

关键词:

摘要: Cervical squamous cell carcinoma (CSCC) is one of the most commonly occurring gynecological malignancies. Because CSCC a biologically heterogeneous disease, its prognosis varies. Therefore, identifying prognostic biomarkers that reflect biological heterogeneity could lead to better interventions for patients with poor prognosis. This study used ESTIMATE algorithm identify immune related genes within tumor microenvironment CSCC. The results revealed high scores were associated overall survival (P = 0.029). Differential expression analysis 384 intersection influencing both and stromal scores. Gene Ontology Kyoto Encyclopedia Genes Genomes analyses showed be mainly enriched T activation, region membrane, carbohydrate binding, cytokine-cytokine receptor interaction. Among them, 149 predictive in These findings provide more comprehensive understanding as well list

参考文章(35)
Mohamed Abou El Hassan, Katherine Huang, Manoja BK Eswara, Michael Zhao, Lan Song, Tao Yu, Yu Liu, Jeffrey C Liu, Sean McCurdy, Anqi Ma, Joan Wither, Jian Jin, Eldad Zacksenhaus, Jeffrey L Wrana, Rod Bremner, None, Cancer Cells Hijack PRC2 to Modify Multiple Cytokine Pathways PLOS ONE. ,vol. 10, pp. e0126466- ,(2015) , 10.1371/JOURNAL.PONE.0126466
Timo Klemola, Kari Varkila, Lina I. Yoo, Katri Vuopala, Minna Poyhonen, Matti Uhari, Martin Rogers, Samuel H. Speck, Talal Chatila, Matthew L. Thomas, Chun Kung, Jeanette T. Pingel, Markku Heikinheimo, Mutations in the tyrosine phosphatase CD45 gene in a child with severe combined immunodeficiency disease Nature Medicine. ,vol. 6, pp. 343- 345 ,(2000) , 10.1038/73208
Simone Punt, Willem E. Corver, Sander A.J. van der Zeeuw, Szymon M. Kielbasa, Elisabeth M. Osse, Henk P.J. Buermans, Cornelis D. de Kroon, Ekaterina S. Jordanova, Arko Gorter, Whole-transcriptome analysis of flow-sorted cervical cancer samples reveals that B cell expressed TCL1A is correlated with improved survival Oncotarget. ,vol. 6, pp. 38681- 38694 ,(2015) , 10.18632/ONCOTARGET.4526
Geoffrey Hom, Robert R. Graham, Barmak Modrek, Kimberly E. Taylor, Ward Ortmann, Sophie Garnier, Annette T. Lee, Sharon A. Chung, Ricardo C. Ferreira, P.V. Krishna Pant, Dennis G. Ballinger, Roman Kosoy, F. Yesim Demirci, M. Ilyas Kamboh, Amy H. Kao, Chao Tian, Iva Gunnarsson, Anders A. Bengtsson, Solbritt Rantapää-Dahlqvist, Michelle Petri, Susan Manzi, Michael F. Seldin, Lars Rönnblom, Ann-Christine Syvänen, Lindsey A. Criswell, Peter K. Gregersen, Timothy W. Behrens, Association of systemic lupus erythematosus with C8orf13-BLK and ITGAM-ITGAX. The New England Journal of Medicine. ,vol. 358, pp. 900- 909 ,(2008) , 10.1056/NEJMOA0707865
J. L. Roberts, R. H. Buckley, B. Luo, J. Pei, A. Lapidus, S. Peri, Q. Wei, J. Shin, R. E. Parrott, R. L. Dunbrack, J. R. Testa, X.-P. Zhong, D. L. Wiest, CD45-deficient severe combined immunodeficiency caused by uniparental disomy Proceedings of the National Academy of Sciences of the United States of America. ,vol. 109, pp. 10456- 10461 ,(2012) , 10.1073/PNAS.1202249109
Davide Risso, John Ngai, Terence P Speed, Sandrine Dudoit, Normalization of RNA-seq data using factor analysis of control genes or samples Nature Biotechnology. ,vol. 32, pp. 896- 902 ,(2014) , 10.1038/NBT.2931
Joseph M. Curry, John Sprandio, David Cognetti, Adam Luginbuhl, Voichita Bar-ad, Edmund Pribitkin, Madalina Tuluc, Tumor Microenvironment in Head and Neck Squamous Cell Carcinoma Seminars in Oncology. ,vol. 41, pp. 217- 234 ,(2014) , 10.1053/J.SEMINONCOL.2014.03.003
A. Marijne Heeren, Bas D. Koster, Sanne Samuels, Debbie M. Ferns, Dafni Chondronasiou, Gemma G. Kenter, Ekaterina S. Jordanova, Tanja D. de Gruijl, High and Interrelated Rates of PD-L1+CD14+ Antigen-Presenting Cells and Regulatory T Cells Mark the Microenvironment of Metastatic Lymph Nodes from Patients with Cervical Cancer Cancer immunology research. ,vol. 3, pp. 48- 58 ,(2015) , 10.1158/2326-6066.CIR-14-0149
E M El-Omar, M T Ng, G L Hold, Polymorphisms in Toll-like receptor genes and risk of cancer Oncogene. ,vol. 27, pp. 244- 252 ,(2008) , 10.1038/SJ.ONC.1210912
Nicolas P Turrin, Carlos R Plata-Salamán, Cytokine-cytokine interactions and the brain. Brain Research Bulletin. ,vol. 51, pp. 3- 9 ,(2000) , 10.1016/S0361-9230(99)00203-8