Verification of strain identity in Brazilian soybean inoculants by using the Polymerase Chain Reaction

作者: Marilu L. Sato , Cayo García-Blásquez , Peter van Berkum

DOI: 10.1023/A:1008927700945

关键词:

摘要: The standards for meeting inoculant quality in Brazil include a requirement of strain verification as well the necessity minimal number viable bacterial cells. This stimulated us to develop rapid and simple PCR-based method distinguish four Brazilian strains Bradyrhizobium, SEMIA 587, 5019 (29W), 5079 (CPAC-15) 5080 (CPAC-7), recommended inoculation soybean. PCR reactions using random amplified polymorphic DNA (RAPD) primer CRL-7 together with modified buffer resulted different fingerprint patterns, which permitted soybean be distinguished from each other. patterns obtained were reproducible irrespective source templates. Comparisons bradyrhizobia USDA Culture Collection led conclusion that two (SEMIA 587 5019) characteristic B. elkanii, while other 5080) more typical japonicum. Also, we evidence RAPD analysis may useful distinguishing variants same strain.

参考文章(17)
P. VAN BERKUM, D. BEYENE, B. D. EARDLY, Phylogenetic Relationships among Rhizobium Species Nodulating the Common Bean (Phaseolus vulgaris L.) International Journal of Systematic and Evolutionary Microbiology. ,vol. 46, pp. 240- 244 ,(1996) , 10.1099/00207713-46-1-240
Anne R. Kubelik, Les J. Szabo, High-GC primers are useful in RAPD analysis of fungi. Current Genetics. ,vol. 28, pp. 384- 389 ,(1995) , 10.1007/BF00326438
Bernard Martin, Odile Humbert, Miguel Camara, Eric Guenzi, John Walker, Timothy Mitchell, Peter Andrew, Marc Prudhomme, Geneviève Alloing, Regine Hakenbeck, Donald A. Morrison, Graham J. Boulnois, Jean-Pierre Claverys, A highly conserved repeated DNA element located in the chromosome of Streptococcus pneumoniae. Nucleic Acids Research. ,vol. 20, pp. 3479- 3483 ,(1992) , 10.1093/NAR/20.13.3479
P. E. Olsen, W. A. Rice, G. W. Stemke, W. J. Page, Strain-specific serological techniques for the identification of Rhizobium meliloti in commercial alfalfa inoculants Canadian Journal of Microbiology. ,vol. 29, pp. 225- 230 ,(1983) , 10.1139/M83-037
A. H. Gibson, D. H. Demezas, R. R. Gault, T. V. Bhuvaneswari, J. Brockwell, Genetic stability in rhizobia in the field Plant and Soil. ,vol. 129, pp. 37- 44 ,(1990) , 10.1007/978-94-011-3336-4_29
A.E. Richardson, L.A. Viccars, J.M. Watson, A.H. Gibson, Differentiation of Rhizobium strains using the polymerase chain reaction with random and directed primers Soil Biology and Biochemistry. ,vol. 27, pp. 515- 524 ,(1995) , 10.1016/0038-0717(95)98626-Y
N G Rumjanek, R C Dobert, P van Berkum, E W Triplett, Common soybean inoculant strains in Brazil are members of Bradyrhizobium elkanii. Applied and Environmental Microbiology. ,vol. 59, pp. 4371- 4373 ,(1993) , 10.1128/AEM.59.12.4371-4373.1993
L. D. Kuykendall, B. Saxena, T. E. Devine, S. E. Udell, Genetic diversity in Bradyrhizobium japonicum Jordan 1982 and a proposal for Bradyrhizobium elkanii sp.nov. Canadian Journal of Microbiology. ,vol. 38, pp. 501- 505 ,(1992) , 10.1139/M92-082