Applying next-generation sequencing to pancreatic cancer treatment.

作者: Elaine R. Mardis

DOI: 10.1038/NRGASTRO.2012.126

关键词:

摘要: Pancreatic cancer is a highly lethal malignancy that presents multiple technical challenges for genomic studies. Next-generation sequencing and its applications have proven successful in the study of other tumour types, unravelling interplay between DNA RNA changes are unique to tumour. This Review outlines studies performed date explored somatic alterations pancreatic genomes, setting stage introduction our current technological capabilities. In spite several challenging aspects posed by tumours particular clinical sequencing-based diagnostics general, next-generation analysis can now be used experiments relating treatment patients with this disease. As means improve patient outcomes, application comprehensive genomes identify therapeutic options proposed.

参考文章(47)
Janet D. Rowley, Harvey M. Golomb, James Vardiman, Shirou Fukuhara, Charlotte Dougherty, David Potter, Further evidence for a non-random chromosomal abnormality in acute promyelocytic leukemia International Journal of Cancer. ,vol. 20, pp. 869- 872 ,(1977) , 10.1002/IJC.2910200608
Thomas J Albert, Michael N Molla, Donna M Muzny, Lynne Nazareth, David Wheeler, Xingzhi Song, Todd A Richmond, Chris M Middle, Matthew J Rodesch, Charles J Packard, George M Weinstock, Richard A Gibbs, Direct selection of human genomic loci by microarray hybridization. Nature Methods. ,vol. 4, pp. 903- 905 ,(2007) , 10.1038/NMETH1111
M VESSEY, Mortality in oral contraceptive users. The Lancet. ,vol. 1, pp. 549- 550 ,(1981) , 10.1016/S0140-6736(81)92875-0
Avo Artinyan, Daniel A. Anaya, Shaun McKenzie, Joshua D. I. Ellenhorn, Joseph Kim, Neoadjuvant therapy is associated with improved survival in resectable pancreatic adenocarcinoma Cancer. ,vol. 117, pp. 2044- 2049 ,(2011) , 10.1002/CNCR.25763
Prateek Kumar, Steven Henikoff, Pauline C Ng, Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm. Nature Protocols. ,vol. 4, pp. 1073- 1081 ,(2009) , 10.1038/NPROT.2009.86
Abel González-Pérez, Nuria López-Bigas, Improving the Assessment of the Outcome of Nonsynonymous SNVs with a Consensus Deleteriousness Score, Condel American Journal of Human Genetics. ,vol. 88, pp. 440- 449 ,(2011) , 10.1016/J.AJHG.2011.03.004
S. A. Forbes, N. Bindal, S. Bamford, C. Cole, C. Y. Kok, D. Beare, M. Jia, R. Shepherd, K. Leung, A. Menzies, J. W. Teague, P. J. Campbell, M. R. Stratton, P. A. Futreal, COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer. Nucleic Acids Research. ,vol. 39, pp. 945- 950 ,(2011) , 10.1093/NAR/GKQ929
JanetD. Rowley, HarveyM. Golomb, Charlotte Dougherty, 15/17 TRANSLOCATION, A CONSISTENT CHROMOSOMAL CHANGE IN ACUTE PROMYELOCYTIC LEUKAEMIA The Lancet. ,vol. 309, pp. 549- 550 ,(1977) , 10.1016/S0140-6736(77)91415-5