The fate is not always written in the genes: Epigenomics in epidemiologic studies

作者: Scott M. Langevin , Karl T. Kelsey

DOI: 10.1002/EM.21762

关键词:

摘要: Cost-effective, high-throughput epigenomic technologies have begun to emerge, rapidly replacing the candidate gene approach molecular epidemiology and offering a comprehensive strategy for study of epigenetics in human subjects. Epigenome-wide association studies (EWAS) provide new opportunities advancing our understanding epigenetic changes associated with complex disease states. However, such analyses are complicated by dynamic nature DNA methylation. In contrast genomic studies, where genotype is essentially constant across somatic cells, EWAS present set challenges, largely due differential methylation distinct cell types, particularly involving heterogeneous tissue sources, profile that occur over time. This review describes potential applications from viewpoint epidemiologist, along special considerations pitfalls involved design studies.

参考文章(74)
Melissa J. Fazzari, John M. Greally, Introduction to Epigenomics and Epigenome-Wide Analysis Methods in Molecular Biology. ,vol. 620, pp. 243- 265 ,(2010) , 10.1007/978-1-60761-580-4_7
R Holliday, J. Pugh, How Are Alkynes Scrambled Science. ,vol. 308, pp. 216- 217 ,(2005) , 10.1126/SCIENCE.1111098
Marta Kulis, Manel Esteller, DNA methylation and cancer. Advances in Genetics. ,vol. 70, pp. 27- 56 ,(2010) , 10.1016/B978-0-12-380866-0.60002-2
Christoph Bock, Analysing and interpreting DNA methylation data. Nature Reviews Genetics. ,vol. 13, pp. 705- 719 ,(2012) , 10.1038/NRG3273
Helmut Gernsheim, W. H. Fox Talbot and the history of photography Endeavour. ,vol. 1, pp. 18- 22 ,(1977) , 10.1016/0160-9327(77)90005-9
Manel Esteller, Epigenetics in Cancer The New England Journal of Medicine. ,vol. 358, pp. 1148- 1159 ,(2008) , 10.1056/NEJMRA072067
Esteban Ballestar, Epigenetics Lessons from Twins: Prospects for Autoimmune Disease Clinical Reviews in Allergy & Immunology. ,vol. 39, pp. 30- 41 ,(2010) , 10.1007/S12016-009-8168-4
Marjolijn J L Ligtenberg, Roland P Kuiper, Tsun Leung Chan, Monique Goossens, Konnie M Hebeda, Marsha Voorendt, Tracy Y H Lee, Danielle Bodmer, Eveline Hoenselaar, Sandra J B Hendriks-Cornelissen, Wai Yin Tsui, Chi Kwan Kong, Han G Brunner, Ad Geurts van Kessel, Siu Tsan Yuen, J Han J M van Krieken, Suet Yi Leung, Nicoline Hoogerbrugge, Heritable somatic methylation and inactivation of MSH2 in families with Lynch syndrome due to deletion of the 3′ exons of TACSTD1 Nature Genetics. ,vol. 41, pp. 112- 117 ,(2009) , 10.1038/NG.283
Zsofia K. Stadler, Joseph Vijai, Peter Thom, Tomas Kirchhoff, Nichole A.L. Hansen, Noah D. Kauff, Mark Robson, Kenneth Offit, Genome-wide association studies of cancer predisposition. Hematology-oncology Clinics of North America. ,vol. 24, pp. 973- 996 ,(2010) , 10.1016/J.HOC.2010.06.009