Data processing on a comparative evaluation of the extraction and analysis procedures for urinary phospholipid and lysophospholipid using MALDI-TOF/MS.
作者： Xin Li , Kenji Nakayama , Takayuki Goto , Shusuke Akamatsu , Koji Shimizu
DOI: 10.1016/J.DIB.2019.104275
关键词:
摘要: In this dataset we provide MALDI-TOF/MS spectra for the testing and application of a quantitative method using external ionization standards (ionization STDs) peak-intensity normalization. The presented data is related to our recent article entitled "a comparative evaluation extraction analysis procedures urinary phospholipid lysophospholipid MALDI-TOF/MS". Gradient dilutions mixture containing thirteen phospho- lysophospho-lipid species (internal were mixed with constant concentration STDs analyzed together. Peak intensities internal picked by homemade workflow based on OpenMS (steps including noise filtration, baseline subtraction peak-picking). ratios between linearly correlated their ratios. Using method, efficiencies six different lipid methods was performed in urine samples. summary, free easy-to-use provided article.
sci-hub.se 参考文章(9)
Atsushi Hara, Norman S. Radin, Lipid extraction of tissues with a low-toxicity solvent Analytical Biochemistry. ,vol. 90, pp. 420- 426 ,(1978) , 10.1016/0003-2697(78)90046-5
Ana Reis, Alisa Rudnitskaya, Gavin J. Blackburn, Norsyahida Mohd Fauzi, Andrew R. Pitt, Corinne M. Spickett, A comparison of five lipid extraction solvent systems for lipidomic studies of human LDL Journal of Lipid Research. ,vol. 54, pp. 1812- 1824 ,(2013) , 10.1194/JLR.M034330
Kim Retra, Onno B. Bleijerveld, Renske A. van Gestel, Aloysius G.M. Tielens, Jaap J. van Hellemond, Jos F. Brouwers, A simple and universal method for the separation and identification of phospholipid molecular species. Rapid Communications in Mass Spectrometry. ,vol. 22, pp. 1853- 1862 ,(2008) , 10.1002/RCM.3562
E. G. Bligh, W. J. Dyer, A rapid method of total lipid extraction and purification. Biochemistry and Cell Biology. ,vol. 37, pp. 911- 917 ,(1959) , 10.1139/O59-099
Vitali Matyash, Gerhard Liebisch, Teymuras V. Kurzchalia, Andrej Shevchenko, Dominik Schwudke, Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics Journal of Lipid Research. ,vol. 49, pp. 1137- 1146 ,(2008) , 10.1194/JLR.D700041-JLR200
Jordi Folch, M. Lees, G.H. Sloane Stanley, A SIMPLE METHOD FOR THE ISOLATION AND PURIFICATION OF TOTAL LIPIDES FROM ANIMAL TISSUES Journal of Biological Chemistry. ,vol. 226, pp. 497- 509 ,(1957) , 10.1016/S0021-9258(18)64849-5
Mutya Cruz, Miao Wang, Jessica Frisch-Daiello, Xianlin Han, Improved Butanol–Methanol (BUME) Method by Replacing Acetic Acid for Lipid Extraction of Biological Samples Lipids. ,vol. 51, pp. 887- 896 ,(2016) , 10.1007/S11745-016-4164-7
Chris Bielow, Hendrik Weisser, Fabian Aicheler, Sandro Andreotti, Hans-Christian Ehrlich, Petra Gutenbrunner, Erhan Kenar, Xiao Liang, Sven Nahnsen, Lars Nilse, Julianus Pfeuffer, George Rosenberger, Marc Rurik, Uwe Schmitt, Johannes Veit, Mathias Walzer, David Wojnar, Witold E Wolski, Oliver Schilling, Jyoti S Choudhary, Lars Malmström, Ruedi Aebersold, Knut Reinert, Oliver Kohlbacher, Hannes L Röst, Timo Sachsenberg, Stephan Aiche, OpenMS: a flexible open-source software platform for mass spectrometry data analysis Nature Methods. ,vol. 13, pp. 741- 748 ,(2016) , 10.1038/NMETH.3959
Xin Li, Kenji Nakayama, Takayuki Goto, Shusuke Akamatsu, Koji Shimizu, Osamu Ogawa, Takahiro Inoue, None, Comparative evaluation of the extraction and analysis of urinary phospholipids and lysophospholipids using MALDI-TOF/MS. Chemistry and Physics of Lipids. ,vol. 223, pp. 104787- ,(2019) , 10.1016/J.CHEMPHYSLIP.2019.104787