HIV-1 Drug Resistance by Ultra-Deep Sequencing Following Short Course Zidovudine, Single-Dose Nevirapine, and Single-Dose Tenofovir with Emtricitabine for Prevention of Mother-to-Child Transmission.

作者: Reshmi Samuel , Marc Noguera Julian , Roger Paredes , Raveen Parboosing , Pravi Moodley

DOI: 10.1097/QAI.0000000000001116

关键词:

摘要: Antiretroviral drug resistance following pMTCT strategies remains a significant problem. With rapid advancements in next generation sequencing technologies, there is more focus on HIV drug-resistant variants of low frequency, or the so-called minority variants. In South Africa, AZT monotherapy for pMTCT, similar to World Health Organization option A, has been used since 2008. 2010, single dose co-formulated TDF/FTC was included strategy prevention conferred by single-dose nevirapine (sd NVP). The study conducted KwaZulu-Natal, among participants who received from 14 weeks gestation, intrapartum and sd NVP, postpartum TDF/FTC. Twenty-six specimens collected at 6 post-delivery were successfully sequenced using 454 ultra-deep sequencing. Non-nucleoside reverse transcriptase inhibitor (NNRTI) detected 17 26 (65%) patients, 2 (7%) had Thymidine analogue mutations, 3 (11%) K65R. Of patients with NNRTI resistance, 11 high-level whereas (35%) intermediate resistance. levels are much higher than would be expected, given inclusion antepartum This high level could impact future NNRTI-containing treatment large proportion pMTCT-exposed women. detection mutations highlights need understand clinical these AZT-containing antiretroviral women exposed monotherapy.

参考文章(36)
Jonathan Z Li, Roger Paredes, Heather J Ribaudo, Evguenia S Svarovskaia, Michael J Kozal, Katherine H Hullsiek, Michael D Miller, David R Bangsberg, Daniel R Kuritzkes, None, Relationship between minority nonnucleoside reverse transcriptase inhibitor resistance mutations, adherence, and the risk of virologic failure. AIDS. ,vol. 26, pp. 185- 192 ,(2012) , 10.1097/QAD.0B013E32834E9D7D
Reshmi Samuel, Roger Paredes, Raveen Parboosing, Pravi Moodley, Lavanya Singh, Anneta Naidoo, Michelle Gordon, A post-partum single-dose TDF/FTC tail does not prevent the selection of NNRTI resistance in women receiving pre-partum ZDV and intrapartum single-dose nevirapine to prevent mother-to- child HIV-1 transmission. Journal of Medical Virology. ,vol. 87, pp. 1662- 1667 ,(2015) , 10.1002/JMV.24220
Birgitte B. Simen, Jan Fredrik Simons, Katherine Huppler Hullsiek, Richard M. Novak, Rodger D. MacArthur, John D. Baxter, Chunli Huang, Christine Lubeski, Gregory S. Turenchalk, Michael S. Braverman, Brian Desany, Jonathan M. Rothberg, Michael Egholm, Michael J. Kozal, , Low-abundance drug-resistant viral variants in chronically HIV-infected, antiretroviral treatment-naive patients significantly impact treatment outcomes. The Journal of Infectious Diseases. ,vol. 199, pp. 693- 701 ,(2009) , 10.1086/596736
Henry Sunpath, Baohua Wu, Michelle Gordon, Jane Hampton, Brent Johnson, Mahomed-Yunus S. Moosa, Claudia Ordonez, Daniel R. Kuritzkes, Vincent C. Marconi, High rate of K65R for antiretroviral therapy-naive patients with subtype C HIV infection failing a tenofovir-containing first-line regimen. AIDS. ,vol. 26, pp. 1679- 1684 ,(2012) , 10.1097/QAD.0B013E328356886D
Charlotte Charpentier, Didier Laureillard, Christophe Piketty, Pascaline Tisserand, Dominique Batisse, Marina Karmochkine, Ali Si-Mohamed, Laurence Weiss, High frequency of integrase Q148R minority variants in HIV-infected patients naive of integrase inhibitors AIDS. ,vol. 24, pp. 867- 873 ,(2010) , 10.1097/QAD.0B013E3283367796
Tamara S Flys, Anthony Mwatha, Laura A Guay, Clemensia Nakabiito, Deborah Donnell, Philippa Musoke, Francis Mmiro, J Brooks Jackson, Susan H Eshleman, Detection of K103N in Ugandan women after repeated exposure to single dose nevirapine. AIDS. ,vol. 21, pp. 2077- 2082 ,(2007) , 10.1097/QAD.0B013E3282703847
Jeffrey A Johnson, Jin-Fen Li, Xierong Wei, Jonathan Lipscomb, David Irlbeck, Charles Craig, Amanda Smith, Diane E Bennett, Michael Monsour, Paul Sandstrom, E. Randall Lanier, Walid Heneine, Minority HIV-1 Drug Resistance Mutations Are Present in Antiretroviral Treatment–Naïve Populations and Associate with Reduced Treatment Efficacy PLOS Medicine. ,vol. 5, ,(2008) , 10.1371/JOURNAL.PMED.0050158
Benjamin H. Chi, Giovanina M. Ellis, Namwinga Chintu, Ronald A. Cantrell, Moses Sinkala, Grace M. Aldrovandi, Ranjit Warrier, Felistas Mbewe, Kyle Nakamura, Elizabeth M. Stringer, Lisa M. Frenkel, Jeffrey S.A. Stringer, Intrapartum Tenofovir and Emtricitabine Reduces Low-Concentration Drug Resistance Selected by Single-Dose Nevirapine for Perinatal HIV Prevention AIDS Research and Human Retroviruses. ,vol. 25, pp. 1099- 1106 ,(2009) , 10.1089/AID.2009.0088
Seth L Welles, Jane Pitt, Robert Colgrove, Kenneth McIntosh, Pei Hua Chung, Amy Colson, Shahin Lockman, Mary Glenn Fowler, Celine Hanson, Sheldon Landesman, John Moye, Kenneth C Rich, Carmen Zorrilla, Anthony J Japour, Women and Infants Transmission Study Group, HIV-1 genotypic zidovudine drug resistance and the risk of maternal-infant transmission in the women and infants transmission study. AIDS. ,vol. 14, pp. 263- 271 ,(2000) , 10.1097/00002030-200002180-00008
Roger Paredes, Vincent C. Marconi, Thomas B. Campbell, Daniel R. Kuritzkes, Systematic evaluation of allele-specific real-time PCR for the detection of minor HIV-1 variants with pol and env resistance mutations Journal of Virological Methods. ,vol. 146, pp. 136- 146 ,(2007) , 10.1016/J.JVIROMET.2007.06.012