Identification of the dominant sulfate-reducing bacterial partner of anaerobic methanotrophs of the ANME-2 clade.

作者: Lars Schreiber , Thomas Holler , Katrin Knittel , Anke Meyerdierks , Rudolf Amann

DOI: 10.1111/J.1462-2920.2010.02275.X

关键词:

摘要: The anaerobic oxidation of methane (AOM) with sulfate as terminal electron acceptor is mediated by consortia of methanotrophic archaea (ANME) and sulfate‐reducing bacteria (SRB). Whereas three clades of ANME have been repeatedly studied with respect to phylogeny, key genes and genomic capabilities, little is known about their sulfate‐reducing partner. In order to identify the partner of anaerobic methanotrophs of the ANME‐2 clade, bacterial 16S rRNA gene libraries were constructed from cultures highly enriched for ANME …

参考文章(55)
J. Pernthaler, A. Pernthaler, A. D. L. Akkermans, G. A. Kowalchuk, R. Amann, I. M. Head, J. D. van Elsas, F. J. de Bruijn, Sensitive multi-color fluorescence in situ hybridization for the identification of environmental microorganisms. Molecular microbial ecology manual. Volumes 1 and 2. pp. 711- 725 ,(2004)
Carsten J. Schubert, Edith Durisch-Kaiser, Christian P. Holzner, Lucia Klauser, Bernhard Wehrli, Oliver Schmale, Jens Greinert, Daniel F. McGinnis, Marc De Batist, Rolf Kipfer, Methanotrophic microbial communities associated with bubble plumes above gas seeps in the Black Sea Geochemistry Geophysics Geosystems. ,vol. 7, ,(2006) , 10.1029/2005GC001049
F. Widdel, K.H. Schleifer, T. A. Hansen, M. Dworkin, W. Harder, A. Balows, H.G. Truper, The dissimilatory sulfate- and sulfur-reducing bacteria. The prokaryotes: a handbook on the biology of bacteria: ecophysiology, isolation, identification, applications, vol.I.. pp. 582- 624 ,(1992)
Andreas Schramm, Bernhard M. Fuchs, Jeppe L. Nielsen, Mauro Tonolla, David A. Stahl, Fluorescence in situ hybridization of 16S rRNA gene clones (Clone-FISH) for probe validation and screening of clone libraries. Environmental Microbiology. ,vol. 4, pp. 713- 720 ,(2002) , 10.1046/J.1462-2920.2002.00364.X
Antje Boetius, Katrin Ravenschlag, Carsten J. Schubert, Dirk Rickert, Friedrich Widdel, Armin Gieseke, Rudolf Amann, Bo Barker Jørgensen, Ursula Witte, Olaf Pfannkuche, A marine microbial consortium apparently mediating anaerobic oxidation of methane Nature. ,vol. 407, pp. 623- 626 ,(2000) , 10.1038/35036572
R I Amann, B J Binder, R J Olson, S W Chisholm, R Devereux, D A Stahl, Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Applied and Environmental Microbiology. ,vol. 56, pp. 1919- 1925 ,(1990) , 10.1128/AEM.56.6.1919-1925.1990
Anke Meyerdierks, Michael Kube, Thierry Lombardot, Katrin Knittel, Margarete Bauer, Frank Oliver Glöckner, Richard Reinhardt, Rudolf Amann, Insights into the genomes of archaea mediating the anaerobic oxidation of methane Environmental Microbiology. ,vol. 7, pp. 1937- 1951 ,(2005) , 10.1111/J.1462-2920.2005.00844.X
Pamela E. Rossel, Julius S. Lipp, Helen F. Fredricks, Julia Arnds, Antje Boetius, Marcus Elvert, Kai-Uwe Hinrichs, Intact polar lipids of anaerobic methanotrophic archaea and associated bacteria Organic Geochemistry. ,vol. 39, pp. 992- 999 ,(2008) , 10.1016/J.ORGGEOCHEM.2008.02.021