Analysis of genetic variation within and among Ulva pertusa (Ulvaceae, Chlorophyta) populations using ISSR markers

作者: Jin Zhao , Peng Jiang , Nan Li , JinFeng Wang , ZhengYi Liu

DOI: 10.1007/S11434-009-0715-0

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摘要: Ulva pertusa is a native species to Asia along the western coast of Pacific Ocean, with new occurrence records in eastern Pacific, northwest Atlantic and Mediterranean Sea. However, little known about its population genetic structure. In this study, twelve U. populations from 3 coastal areas China: Qingdao, Yantai Dalian, were applied ISSR analysis. The selected 4 primers amplified 120 polymorphic bands totally. Nei's gene diversity (H) ranged 0.0729 0.1496, Shannon's information index (I) 0.1072 0.2196. Genetic was greater within Qingdao (H = 0.2069, I 0.3232). Analysis molecular variance (AMOVA) showed greatest (68.57%), much less among (22.63%) (8.79%). Unweighted pair-group mean analysis (UPGMA) indicated that clustering individuals mainly relates their geographic distances separating those populations. differentiation limited flow by

参考文章(27)
Racal Aguilar-Rosasl, Luis E. Aguilar-Rosas, Satoshi Shimada, First Record of Ulva pertusa Kjellman (Ulvales, Chlorophyta) in the Pacific Coast of Mexico Algae. ,vol. 23, pp. 201- 207 ,(2008) , 10.4490/ALGAE.2008.23.3.201
Andrea D. Wolfe, Aaron Liston, Contributions of PCR-Based Methods to Plant Systematics and Evolutionary Biology Molecular Systematics of Plants II. pp. 43- 86 ,(1998) , 10.1007/978-1-4615-5419-6_2
Xiuliang Wang, Fengjuan Zhao, Zimin Hu, Alan T. Critchley, Steve L. Morrell, Delin Duan, Inter-simple sequence repeat (ISSR) analysis of genetic variation of Chondrus crispus populations from North Atlantic Aquatic Botany. ,vol. 88, pp. 154- 159 ,(2008) , 10.1016/J.AQUABOT.2007.10.001
Shanmukhaswami S. Salimath, Antonio C. de Oliveira, Jeffrey L. Bennetzen, Ian D. Godwin, Assessment of genome origins and genetic diversity in the genus Eleusine with DNA markers. Genome. ,vol. 38, pp. 757- 763 ,(1995) , 10.1139/G95-096
D. R. Huff, R. Peakall, P. E. Smouse, RAPD variation within and among natural populations of outcrossing buffalograss [Buchloë dactyloides (Nutt.) Engelm.] Theoretical and Applied Genetics. ,vol. 86, pp. 927- 934 ,(1993) , 10.1007/BF00211043
Masatoshi Nei, Wen-Hsiung Li, Mathematical model for studying genetic variation in terms of restriction endonucleases Proceedings of the National Academy of Sciences of the United States of America. ,vol. 76, pp. 5269- 5273 ,(1979) , 10.1073/PNAS.76.10.5269
Harvey E. Ballard, Kenneth J. Sytsma, Robert R. Kowal, Shrinking the Violets: Phylogenetic Relationships of Infrageneric Groups in Viola (Violaceae) Based on Internal Transcribed Spacer DNA Sequences Systematic Botany. ,vol. 23, pp. 439- 458 ,(1998) , 10.2307/2419376