Mu transpososome activity-profiling yields hyperactive MuA variants for highly efficient genetic and genome engineering.

作者: Tiina S Rasila , Elsi Pulkkinen , Saija Kiljunen , Saija Haapa-Paananen , Maria I Pajunen

DOI: 10.1093/NAR/GKX1281

关键词:

摘要: The phage Mu DNA transposition system provides a versatile species non-specific tool for molecular biology, genetic engineering and genome modification applications. is catalyzed by MuA transposase, with cleavage integration reactions ultimately attaching the transposon to target DNA. To improve activity of machinery, we mutagenized protein screened hyperactivity-causing substitutions using an in vivo assay. individual activity-enhancing were mapped onto MuA-DNA complex structure, containing tetramer two end segments This analysis, combined varying effect mutations different assays, implied that exert their effects several ways, including optimizing protein-protein protein-DNA contacts. Based on these insights, engineered highly hyperactive versions MuA, combining synergistically acting located subdomains protein. Purified variants are now ready use as second-generation tools variety Mu-based These will also widen scope gene transfer technologies toward medical applications such human therapy. Moreover, work platform further design custom transposases.

参考文章(50)
H. Savilahti, P. A. Rice, K. Mizuuchi, The phage Mu transpososome core: DNA requirements for assembly and function. The EMBO Journal. ,vol. 14, pp. 4893- 4903 ,(1995) , 10.1002/J.1460-2075.1995.TB00170.X
Mobile DNA III Mobile DNA III.. ,(2002) , 10.1128/9781555817954
Transposable Phage Mu. Microbiology spectrum. ,vol. 2, pp. 669- 691 ,(2014) , 10.1128/MICROBIOLSPEC.MDNA3-0007-2014
Alison B. Hickman, Hosam E. Ewis, Xianghong Li, Joshua A. Knapp, Thomas Laver, Anna-Louise Doss, Gökhan Tolun, Alasdair C. Steven, Alexander Grishaev, Ad Bax, Peter W. Atkinson, Nancy L. Craig, Fred Dyda, Structural Basis of Hat Transposon End Recognition by Hermes, an Octameric DNA Transposase from Musca Domestica. Cell. ,vol. 158, pp. 353- 367 ,(2014) , 10.1016/J.CELL.2014.05.037
Tania A. Baker, Michiyo Mizuuchi, Harri Savilahti, Kiyoshi Mizuuchi, Division of labor among monomers within the Mu transposase tetramer Cell. ,vol. 74, pp. 723- 733 ,(1993) , 10.1016/0092-8674(93)90519-V
Tania A. Baker, Michiyo Mizuuchi, Kiyoshi Mizuuchi, MuB protein allosterically activates strand transfer by the transposase of phage Mu Cell. ,vol. 65, pp. 1003- 1013 ,(1991) , 10.1016/0092-8674(91)90552-A
Saija Haapa-Paananen, Hannu Rita, Harri Savilahti, DNA transposition of bacteriophage Mu. A quantitative analysis of target site selection in vitro. Journal of Biological Chemistry. ,vol. 277, pp. 2843- 2851 ,(2002) , 10.1074/JBC.M108044200
Min-Sung Kim, Mikalai Lapkouski, Wei Yang, Martin Gellert, Crystal structure of the V(D)J recombinase RAG1–RAG2 Nature. ,vol. 518, pp. 507- 511 ,(2015) , 10.1038/NATURE14174