Chapter 25. SNPs: A human genetic tool for the new millennium

作者: Albert B. Seeymour , Poulabi Banerjee , Aidan Power , Patrice M. Milos

DOI: 10.1016/S0065-7743(03)38026-1

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摘要: Publisher Summary This chapter presents an overview of single nucleotide polymorphisms (SNPs). SNPs are the result a substitution at specific location in genome and have been identified as cause many diseases phenotypes such sickle cell anemia differences blood groups. The recent completion human sequence efforts SNP Consortium, collaboration among 13 pharmaceutical companies Wellcome Trust, has resulted identification mapping more than 3,000,000 across genome. vast majority biallelic, although there several examples triallelic SNPs. described for all possible transitions transversions, most common is A/G transition due to 5-methylcytosine deamination reactions that occur frequently, particularly CpG dinucleotides. range frequency from 1% 50% general population part observed ethnicities. provides genetic discusses need It also characterization, implications study design, utility medicine industry.

参考文章(46)
I. Barroso, M. Gurnell, V. E. F. Crowley, M. Agostini, J. W. Schwabe, M. A. Soos, G. LI Maslen, T. D. M. Williams, H. Lewis, A. J. Schafer, V. K. K. Chatterjee, S. O'Rahilly, Dominant negative mutations in human PPARγ associated with severe insulin resistance, diabetes mellitus and hypertension Nature. ,vol. 402, pp. 880- 883 ,(1999) , 10.1038/47254
Mark J. Daly, John D. Rioux, Stephen F. Schaffner, Thomas J. Hudson, Eric S. Lander, High-resolution haplotype structure in the human genome. Nature Genetics. ,vol. 29, pp. 229- 232 ,(2001) , 10.1038/NG1001-229
J L Weber, P E May, Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction American Journal of Human Genetics. ,vol. 44, pp. 388- 396 ,(1989)
Allen D. Roses, Pharmacogenetics and the practice of medicine. Nature. ,vol. 405, pp. 857- 865 ,(2000) , 10.1038/35015728
Neil J. Risch, Searching for genetic determinants in the new millennium Nature. ,vol. 405, pp. 847- 856 ,(2000) , 10.1038/35015718
James J. Goedert, Raleigh Boaze, R. Palmer Beasley, Mark Ramsburg, Bernard J. Albaugh, Lauren Charbonneau, Claudia Stewart, J. Claiborne Stephens, Deborah A. Lomb, Susan Buchbinder, Cheryl Winkler, Michael Dean, Mary Eichelberger, David Goldman, Stephen J. O'Brien, Lu Yu Hwang, Michael Weedon, Patricia A. Johnson, Polymorphic admixture typing in human ethnic populations. American Journal of Human Genetics. ,vol. 55, pp. 788- 808 ,(1994)
D Botstein, R W Davis, R L White, M Skolnick, Construction of a genetic linkage map in man using restriction fragment length polymorphisms. American Journal of Human Genetics. ,vol. 32, pp. 314- 331 ,(1980)
Joëlle Thillet, Alun Evans, Jean-Bernard Ruidavets, Dominique Arveiler, Gérald Luc, Laurence Tiret, François Cambien, Odette Poirier, Viviane Nicaud, Stefan-Martin Herrmann, Christine Mallet, Sylvain Ricard, Isabelle Behague, Vincent Hallet, Hervé Blanc, Valérie Loukaci, Sequence diversity in 36 candidate genes for cardiovascular disorders. American Journal of Human Genetics. ,vol. 65, pp. 183- 191 ,(1999) , 10.1086/302448
U Brinkmann, M Eichelbaum, Polymorphisms in the ABC drug transporter gene MDR1. Pharmacogenomics Journal. ,vol. 1, pp. 59- 64 ,(2001) , 10.1038/SJ.TPJ.6500001