Repair and recombination induced by triple helix DNA

作者: Joanna Y Chin , Erica B Schleifman , Peter M Glazer

DOI: 10.2741/2388

关键词:

摘要: Triple-helix DNA structures can form endogenously at mirror repeat polypurine/polypyrimidine sequences or by introduction of triplex-forming oligonucleotides (TFOs). Recent evidence suggests that triple helices are sources genetic instability, and subject to increased rates mutagenesis recruitment repair factors. Indeed, observations using TFOs suggest provoke a variety biological processes which be harnessed modulate gene expression induce heritable changes in targeted genes. This review surveys the applications TFOs, with particular attention their recombinogenic mutagenic potential, summarizes available for mechanism triplex triplex-associated repair.

参考文章(48)
B. Rodu, M. Squibb, C. Mayfield, Jay Gee, D. Jones, S. Ebbinghaus, D. Miller, Triplex formation by the human Ha-ras promoter inhibits Sp1 binding and in vitro transcription. Journal of Biological Chemistry. ,vol. 269, pp. 18232- 18238 ,(1994) , 10.1016/S0021-9258(17)32439-0
D.A. Hartman, S.R. Kuo, T.R. Broker, L.T. Chow, R.D. Wells, Intermolecular triplex formation distorts the DNA duplex in the regulatory region of human papillomavirus type-11. Journal of Biological Chemistry. ,vol. 267, pp. 5488- 5494 ,(1992) , 10.1016/S0021-9258(18)42792-5
Alokes Majumdar, Alexander Khorlin, Natalia Dyatkina, F.-L. Michael Lin, James Powell, Jilan Liu, Zhizhong Fei, Yuri Khripine, Kyoichi A. Watanabe, Jay George, Peter M. Glazer, Michael M. Seidman, Targeted gene knockout mediated by triple helix forming oligonucleotides. Nature Genetics. ,vol. 20, pp. 212- 214 ,(1998) , 10.1038/2530
G. Degols, J.P. Clarenc, B. Lebleu, J.P. Léonetti, Reversible inhibition of gene expression by a psoralen functionalized triple helix forming oligonucleotide in intact cells. Journal of Biological Chemistry. ,vol. 269, pp. 16933- 16937 ,(1994) , 10.1016/S0021-9258(19)89479-6
Sally Richards, Su-Ting Liu, Alokes Majumdar, Ji-Lan Liu, Rodney S Nairn, Michel Bernier, Veronica Maher, Michael M Seidman, Triplex targeted genomic crosslinks enter separable deletion and base substitution pathways Nucleic Acids Research. ,vol. 33, pp. 5382- 5393 ,(2005) , 10.1093/NAR/GKI851
K. M. Vasquez, J. Christensen, L. Li, R. A. Finch, P. M. Glazer, Human XPA and RPA DNA repair proteins participate in specific recognition of triplex-induced helical distortions Proceedings of the National Academy of Sciences of the United States of America. ,vol. 99, pp. 5848- 5853 ,(2002) , 10.1073/PNAS.082193799
A. Bacolla, A. Jaworski, J. E. Larson, J. P. Jakupciak, N. Chuzhanova, S. S. Abeysinghe, C. D. O'Connell, D. N. Cooper, R. D. Wells, Breakpoints of gross deletions coincide with non-B DNA conformations Proceedings of the National Academy of Sciences of the United States of America. ,vol. 101, pp. 14162- 14167 ,(2004) , 10.1073/PNAS.0405974101
Sathees C. Raghavan, Patrick C. Swanson, Xiantuo Wu, Chih-Lin Hsieh, Michael R. Lieber, A non-B-DNA structure at the Bcl-2 major breakpoint region is cleaved by the RAG complex. Nature. ,vol. 428, pp. 88- 93 ,(2004) , 10.1038/NATURE02355
Sarah B. Noonberg, Jean-Christophe François, Thérsèe Garestier, Claude Héiène, Effect of competing self-structure on triplex formation with purine-rich oligodeoxynucleotides containing GA repeats. Nucleic Acids Research. ,vol. 23, pp. 1956- 1963 ,(1995) , 10.1093/NAR/23.11.1956
Maria Duca, Dominique Guianvarc'h, Kahina Oussedik, Ludovic Halby, Anna Garbesi, Daniel Dauzonne, Claude Monneret, Neil Osheroff, Carine Giovannangeli, Paola B Arimondo, Molecular basis of the targeting of topoisomerase II-mediated DNA cleavage by VP16 derivatives conjugated to triplex-forming oligonucleotides Nucleic Acids Research. ,vol. 34, pp. 1900- 1911 ,(2006) , 10.1093/NAR/GKL126