The limits of log-ratios

作者: Vasily Sharov , Ka Kwong , Bryan Frank , Emily Chen , Jeremy Hasseman

DOI: 10.1186/1472-6750-4-3

关键词:

摘要: Background DNA microarray assays typically compare two biological samples and present the results of those comparisons gene-by-gene as logarithm base ratio measured expression levels for samples.

参考文章(3)
A.I. Saeed, V. Sharov, J. White, J. Li, W. Liang, N. Bhagabati, J. Braisted, M. Klapa, T. Currier, M. Thiagarajan, A. Sturn, M. Snuffin, A. Rezantsev, D. Popov, A. Ryltsov, E. Kostukovich, I. Borisovsky, Z. Liu, A. Vinsavich, V. Trush, J. Quackenbush, TM4: a free, open-source system for microarray data management and analysis. BioTechniques. ,vol. 34, pp. 374- 378 ,(2003) , 10.2144/03342MT01
R Radha, S Jayalakshmi, SP Rajagopalan, AA Alizadeh, MB Eisen, RE Davis, C Ma, IS Lossos, T Ando, M Katayama, DG Beer, LRK Sharon, CC Huang, TJ Giordano, AM Levin, SM Chen, YC Chen, DR Cox, U Fayyad, K Irani, M LeBlanc, H Liu, J Li, L Wong, M Lunn, DR McNeil, B Maurice, R Panneerselvam, PJ Park, L Tian, S Kohane, A Rosenwald, MA Shipp, MJ Van de Vijver, YD He, LJ van't Veer, H Dai, AA Hart, YH Yang, S Dudoit, P Luu, DM Lin, V Peng, J Ngai, TP Speed, Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation Nucleic Acids Research. ,vol. 30, ,(2002) , 10.1093/NAR/30.4.E15
Ivana V Vyang, Emily Chen, Jeremy P Hasseman, Wei Liang, Bryan C Frank, Shuibang Wang, Vasily Sharov, Alexander I Saeed, Joseph White, Jerry Li, Norman H Lee, Timothy J Yeatman, John Quackenbush, Within the fold: assessing differential expression measures and reproducibility in microarray assays. Genome Biology. ,vol. 3, pp. 1- 13 ,(2002) , 10.1186/GB-2002-3-11-RESEARCH0062