Predicting Hybrid Performances for Quality Traits through Genomic-Assisted Approaches in Central European Wheat

作者: Guozheng Liu , Yusheng Zhao , Manje Gowda , C. Friedrich H. Longin , Jochen C. Reif

DOI: 10.1371/JOURNAL.PONE.0158635

关键词:

摘要: Bread-making quality traits are central targets for wheat breeding. The objectives of our study were to (1) examine the presence major effect QTLs in a Central European elite population, (2) explore optimal strategy predicting hybrid performance traits, and (3) investigate effects marker density composition size training population on accuracy prediction performance. In total 135 inbred lines bread (Triticum aestivum L.) 1,604 hybrids derived from them evaluated seven up six environments. parental genotyped using 90k single-nucleotide polymorphism array. Genome-wide association mapping initially suggested several quantitative trait loci (QTLs), but cross-validation rather indicated absence all except 1000-kernel weight. Genomic selection substantially outperformed marker-assisted A resampling revealed that increasing effective estimation set is relevant boost an unrelated test population.

参考文章(70)
A. E. Melchinger, T. A. Schrag, M. Frisch, B. S. Dhillon, Marker-based prediction of hybrid performance in maize single-crosses involving doubled haploids Maydica. ,vol. 54, pp. 353- 362 ,(2009)
Charles R Henderson, Applications of linear models in animal breeding Published in <b>1984</b> in Guelph by University of Guelph. ,(1984)
T. H. E. Meuwissen, M. E. Goddard, B. J. Hayes, Prediction of Total Genetic Value Using Genome-Wide Dense Marker Maps Genetics. ,vol. 157, pp. 1819- 1829 ,(2001) , 10.1093/GENETICS/157.4.1819
L. H. Wang, X. L. Zhao, Z. H. He, W. Ma, R. Appels, R. J. Peña, X. C. Xia, Characterization of low-molecular-weight glutenin subunit Glu-B3 genes and development of STS markers in common wheat (Triticum aestivum L.) Theoretical and Applied Genetics. ,vol. 118, pp. 525- 539 ,(2009) , 10.1007/S00122-008-0918-9
Yusheng Zhao, Michael F. Mette, Jochen C. Reif, Genomic selection in hybrid breeding Plant Breeding. ,vol. 134, pp. 1- 10 ,(2015) , 10.1111/PBR.12231
C. J. Peterson, R. A. Graybosch, D. R. Shelton, P. S. Baenziger, Baking quality of hard winter wheat: Response of cultivars to environment in the Great Plains Euphytica. ,vol. 100, pp. 223- 228 ,(1998) , 10.1007/978-94-011-4896-2_30
Dan Liang, Jianwei Tang, Roberto Javier Pena, Ravi Singh, Xinyao He, Xiaoyong Shen, Danian Yao, Xianchun Xia, Zhonghu He, None, Characterization of CIMMYT bread wheats for high- and low-molecular weight glutenin subunits and other quality-related genes with SDS-PAGE, RP-HPLC and molecular markers Euphytica. ,vol. 172, pp. 235- 250 ,(2010) , 10.1007/S10681-009-0054-X