A High-Resolution Comparative Chromosome Map of Cricetus cricetus and Peromyscus eremicus Reveals the Involvement of Constitutive Heterochromatin in Breakpoint Regions
作者： Ana Vieira-da-Silva , Sandra Louzada , Filomena Adega , Raquel Chaves
DOI: 10.1159/000381840
关键词:
摘要: Compared to humans and other mammals, rodent genomes, specifically Muroidea species, underwent intense chromosome reshuffling in which many complex structural rearrangements occurred. This fact makes them preferential animal models for studying the process of karyotype evolution. Here, we present first combined comparative maps between 2 Cricetidae Cricetus cricetus Peromyscus eremicus, index species Mus musculus Rattus norvegicus. Comparative painting was done using mouse rat paint probes together with silico analysis from Ensembl genome browser database. Hereby, evolutionary events (inter- intrachromosomal rearrangements) that occurred C. P. eremicus since putative ancestral could be inferred, breakpoint regions detected. A colocalization constitutive heterochromatin each observed. Our results suggest involvement restructuring these despite different levels conservation (derivative) (conserved) genomes.
karger.com
sci-hub.se 参考文章(57)
F. Yang, P. C. M. O’Brien, J. Wienberg, M. A. Ferguson-Smith, A reappraisal of the tandem fusion theory of karyotype evolution in Indian muntjac using chromosome painting. Chromosome Research. ,vol. 5, pp. 109- 117 ,(1997) , 10.1023/A:1018466107822
William J Murphy, Roscoe Stanyon, Stephen J O'Brien, Evolution of mammalian genome organization inferred from comparative gene mapping Genome Biology. ,vol. 2, pp. 1- 8 ,(2001) , 10.1186/GB-2001-2-6-REVIEWS0005
Jean-Yves Dubois, Daniel Rakotondravony, Catherine H�nni, Patricia Sourrouille, Fran�ois M. Catzeflis, Molecular evolutionary relationships of three genera of nesomyinae, endemic rodent taxa from madagascar Journal of Mammalian Evolution. ,vol. 3, pp. 239- 260 ,(1996) , 10.1007/BF01458182
Clifton M Ramsdell, Adrienne A Lewandowski, Julie Glenn, Paul B Vrana, Rachel J O'Neill, Michael J Dewey, Comparative genome mapping of the deer mouse (Peromyscus maniculatus) reveals greater similarity to rat (Rattus norvegicus) than to the lab mouse (Mus musculus). BMC Evolutionary Biology. ,vol. 8, pp. 65- 65 ,(2008) , 10.1186/1471-2148-8-65
J D Brown, S E Mitchell, R J O'Neill, Making a long story short: noncoding RNAs and chromosome change. Heredity. ,vol. 108, pp. 42- 49 ,(2012) , 10.1038/HDY.2011.104
Marc Robinson, François Catzeflis, Jérôme Briolay, Dominique Mouchiroud, Molecular Phylogeny of Rodents, with Special Emphasis on Murids: Evidence from Nuclear Gene LCAT☆ Molecular Phylogenetics and Evolution. ,vol. 8, pp. 423- 434 ,(1997) , 10.1006/MPEV.1997.0424
Sandra Louzada, Ana Paço, Svatava Kubickova, Filomena Adega, Henrique Guedes-Pinto, Jiri Rubes, Raquel Chaves, None, Different evolutionary trails in the related genomes Cricetus cricetus and Peromyscus eremicus (Rodentia, Cricetidae) uncovered by orthologous satellite DNA repositioning. Micron. ,vol. 39, pp. 1149- 1155 ,(2008) , 10.1016/J.MICRON.2008.05.008
Raquel Chaves, Sandra Louzada, Susana Meles, Johannes Wienberg, Filomena Adega, Praomys tullbergi (Muridae, Rodentia) genome architecture decoded by comparative chromosome painting with Mus and Rattus Chromosome Research. ,vol. 20, pp. 673- 683 ,(2012) , 10.1007/S10577-012-9304-1
J. H. Nadeau, B. A. Taylor, Lengths of chromosomal segments conserved since divergence of man and mouse. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 81, pp. 814- 818 ,(1984) , 10.1073/PNAS.81.3.814
T ROBINSON, A RUIZHERRERA, L FROENICKE, Dissecting the mammalian genome--new insights into chromosomal evolution. Trends in Genetics. ,vol. 22, pp. 297- 301 ,(2006) , 10.1016/J.TIG.2006.04.002