Single-cell genome sequencing: current state of the science

作者: Charles Gawad , Winston Koh , Stephen R. Quake

DOI: 10.1038/NRG.2015.16

关键词:

摘要: … The field of single-cell genomics is advancing rapidly and is … state of the field of single-cell genome sequencing. First, we focus on … Areas highlighted include the application of single-cell …

参考文章(121)
William Turner, The Cell Theory, Past And Present: ,(2009)
Zachary C. Landry, Stephen J. Giovanonni, Stephen R. Quake, Paul C. Blainey, Optofluidic Cell Selection from Complex Microbial Communities for Single-Genome Analysis Methods in Enzymology. ,vol. 531, pp. 61- 90 ,(2013) , 10.1016/B978-0-12-407863-5.00004-6
Yong Hou, Kui Wu, Xulian Shi, Fuqiang Li, Luting Song, Hanjie Wu, Michael Dean, Guibo Li, Shirley Tsang, Runze Jiang, Xiaolong Zhang, Bo Li, Geng Liu, Niharika Bedekar, Na Lu, Guoyun Xie, Han Liang, Liao Chang, Ting Wang, Jianghao Chen, Yingrui Li, Xiuqing Zhang, Huanming Yang, Xun Xu, Ling Wang, Jun Wang, Comparison of variations detection between whole-genome amplification methods used in single-cell resequencing GigaScience. ,vol. 4, pp. 37- 37 ,(2015) , 10.1186/S13742-015-0068-3
Yusi Fu, Chunmei Li, Sijia Lu, Wenxiong Zhou, Fuchou Tang, X. Sunney Xie, Yanyi Huang, Uniform and accurate single-cell sequencing based on emulsion whole-genome amplification Proceedings of the National Academy of Sciences of the United States of America. ,vol. 112, pp. 11923- 11928 ,(2015) , 10.1073/PNAS.1513988112
Elli Papaemmanuil, Inmaculada Rapado, Yilong Li, Nicola E Potter, David C Wedge, Jose Tubio, Ludmil B Alexandrov, Peter Van Loo, Susanna L Cooke, John Marshall, Inigo Martincorena, Jonathan Hinton, Gunes Gundem, Frederik W van Delft, Serena Nik-Zainal, David R Jones, Manasa Ramakrishna, Ian Titley, Lucy Stebbings, Catherine Leroy, Andrew Menzies, John Gamble, Ben Robinson, Laura Mudie, Keiran Raine, Sarah O'Meara, Jon W Teague, Adam P Butler, Giovanni Cazzaniga, Andrea Biondi, Jan Zuna, Helena Kempski, Markus Muschen, Anthony M Ford, Michael R Stratton, Mel Greaves, Peter J Campbell, RAG-mediated recombination is the predominant driver of oncogenic rearrangement in ETV6-RUNX1 acute lymphoblastic leukemia Nature Genetics. ,vol. 46, pp. 116- 125 ,(2014) , 10.1038/NG.2874
Roger S. Lasken, Jeffrey S. McLean, Recent advances in genomic DNA sequencing of microbial species from single cells Nature Reviews Genetics. ,vol. 15, pp. 577- 584 ,(2014) , 10.1038/NRG3785
Andrew E. O. Hughes, Vincent Magrini, Ryan Demeter, Christopher A. Miller, Robert Fulton, Lucinda L. Fulton, William C. Eades, Kevin Elliott, Sharon Heath, Peter Westervelt, Li Ding, Donald F. Conrad, Brian S. White, Jin Shao, Daniel C. Link, John F. DiPersio, Elaine R. Mardis, Richard K. Wilson, Timothy J. Ley, Matthew J. Walter, Timothy A. Graubert, Clonal Architecture of Secondary Acute Myeloid Leukemia Defined by Single-Cell Sequencing PLoS Genetics. ,vol. 10, pp. e1004462- ,(2014) , 10.1371/JOURNAL.PGEN.1004462
Frank B Dean, John R Nelson, Theresa L Giesler, Roger S Lasken, Rapid Amplification of Plasmid and Phage DNA Using Phi29 DNA Polymerase and Multiply-Primed Rolling Circle Amplification Genome Research. ,vol. 11, pp. 1095- 1099 ,(2001) , 10.1101/GR.180501
Arkadiusz Piotrowski, Carl EG Bruder, Robin Andersson, Teresita Diaz de Ståhl, Uwe Menzel, Johanna Sandgren, Andrzej Poplawski, Desiree von Tell, Chiquito Crasto, Adam Bogdan, Rafal Bartoszewski, Zsuzsa Bebok, Maciej Krzyzanowski, Zbigniew Jankowski, E Christopher Partridge, Jan Komorowski, Jan P Dumanski, None, Somatic mosaicism for copy number variation in differentiated human tissues. Human Mutation. ,vol. 29, pp. 1118- 1124 ,(2008) , 10.1002/HUMU.20815
A. B. Troutt, M. G. McHeyzer-Williams, B. Pulendran, G. J. Nossal, Ligation-anchored PCR: a simple amplification technique with single-sided specificity. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 89, pp. 9823- 9825 ,(1992) , 10.1073/PNAS.89.20.9823