Microarray-based genomic selection for high-throughput resequencing.
作者： David T Okou , Karyn Meltz Steinberg , Christina Middle , David J Cutler , Thomas J Albert
DOI: 10.1038/NMETH1109
关键词:
摘要: We developed a general method, microarray-based genomic selection (MGS), capable of selecting and enriching targeted sequences from complex eukaryotic genomes without the repeat blocking steps necessary for bacterial artificial chromosome (BAC)-based selection. demonstrate that large human regions, on order hundreds kilobases, can be enriched resequenced with resequencing arrays. MGS, when combined next-generation technology, enable large-scale in single-investigator laboratories.
nature.com
sci-hub.se 参考文章(19)
Natalay Kouprina, Vladimir N. Noskov, Vladimir Larionov, Selective isolation of large chromosomal regions by transformation-associated recombination cloning for structural and functional analysis of mammalian genomes. Methods of Molecular Biology. ,vol. 349, pp. 85- 101 ,(2006) , 10.1385/1-59745-158-4:85
David J. Cutler, Michael E. Zwick, Minerva M. Carrasquillo, Christopher T. Yohn, Katherine P. Tobin, Carl Kashuk, Debra J. Mathews, Nila A. Shah, Evan E. Eichler, Janet A. Warrington, Aravinda Chakravarti, High-Throughput Variation Detection and Genotyping Using Microarrays Genome Research. ,vol. 11, pp. 1913- 1925 ,(2001) , 10.1101/GR.197201
Thomas J Albert, Michael N Molla, Donna M Muzny, Lynne Nazareth, David Wheeler, Xingzhi Song, Todd A Richmond, Chris M Middle, Matthew J Rodesch, Charles J Packard, George M Weinstock, Richard A Gibbs, Direct selection of human genomic loci by microarray hybridization. Nature Methods. ,vol. 4, pp. 903- 905 ,(2007) , 10.1038/NMETH1111
Jay Shendure, Gregory J Porreca, Nikos B Reppas, Xiaoxia Lin, John P McCutcheon, Abraham M Rosenbaum, Michael D Wang, Kun Zhang, Robi D Mitra, George M Church, Accurate Multiplex Polony Sequencing of an Evolved Bacterial Genome Science. ,vol. 309, pp. 1728- 1732 ,(2005) , 10.1126/SCIENCE.1117389
Stavros Bashiardes, Rose Veile, Cynthia Helms, Elaine R Mardis, Anne M Bowcock, Michael Lovett, Direct genomic selection. Nature Methods. ,vol. 2, pp. 63- 69 ,(2005) , 10.1038/NMETH0105-63
Jay Shendure, Robi D. Mitra, Chris Varma, George M. Church, Advanced sequencing technologies: methods and goals. Nature Reviews Genetics. ,vol. 5, pp. 335- 344 ,(2004) , 10.1038/NRG1325
Dirk A. Kleinjan, Veronica van Heyningen, Long-Range Control of Gene Expression: Emerging Mechanisms and Disruption in Disease American Journal of Human Genetics. ,vol. 76, pp. 8- 32 ,(2005) , 10.1086/426833
Kristel De Boulle, Annemieke J.M.H. Verkerk, Edwin Reyniers, Lieve Vits, Jan Hendrickx, Bernadette Van Roy, Feikje Van Den Bos, Esther de Graaff, Ben A. Oostra, Patrick J. Willems, A point mutation in the FMR-1 gene associated with fragile X mental retardation Nature Genetics. ,vol. 3, pp. 31- 35 ,(1993) , 10.1038/NG0193-31
Christopher K. Raymond, Sandhya Subramanian, Marcia Paddock, Ruolan Qiu, Chloe Deodato, Anthony Palmieri, Jean Chang, Tana Radke, Eric Haugen, Arnie Kas, David Waring, Donald Bovee, Robin Stacy, Rajinder Kaul, Maynard V. Olson, Targeted, haplotype-resolved resequencing of long segments of the human genome. Genomics. ,vol. 86, pp. 759- 766 ,(2005) , 10.1016/J.YGENO.2005.08.013
David R Bentley, Whole-genome re-sequencing. Current Opinion in Genetics & Development. ,vol. 16, pp. 545- 552 ,(2006) , 10.1016/J.GDE.2006.10.009