The histone H3 lysine 27-specific demethylase Jmjd3 is required for neural commitment.

作者: Thomas Burgold , Fabio Spreafico , Francesca De Santa , Maria Grazia Totaro , Elena Prosperini

DOI: 10.1371/JOURNAL.PONE.0003034

关键词:

摘要: Patterns of methylation at lysine 4 and 27 histone H3 have been associated with states gene activation repression that are developmentally regulated thought to underlie the establishment lineage specific expression programs. Recent studies provided fundamental insight into problem specification by comparing global changes in chromatin transcription between ES neural stem (NS) cells, points respectively departure arrival for commitment. With these maps differentiated state place, a central task is now unravel dynamics enables differentiation transitions. In particular, observation lineage-specific genes repressed cells Polycomb-mediated H3-K27 trimethylation (H3-K27me3) demethylated derepressed posited existence demethylase. In order gain epigenetic transitions enable specification, we investigated early stages commitment using as model system monolayer mouse cells. Starting from comprehensive profiling JmjC-domain genes, report here Jmjd3, recently identified H3-K27me3 demethylase, controls key regulators markers neurogenesis required lineage. Our results demonstrate relevance an enzymatic activity antagonizes Polycomb regulation highlight different modalities through which related transcriptional output. By showing demethylase Jmjd3 it resolves bivalent domain Nestin promoter, our work confirms functional resolution had on basis genome-wide correlation their controlled differentiation. addition, data indicate highly gene- context- specific, suggesting interplay methyltransferases demethylases fine-tuning more than on/off alternation states.

参考文章(28)
Brigid Hogan, Elizabeth Lacy, Frank Costantini, Manipulating the mouse embryo: A laboratory manual ,(1986)
Marina Gertsenstein, Kristina Vintersten Nagy, Andras Nagy, Richard Behringer, Manipulating the Mouse Embryo: A Laboratory Manual ,(2002)
Bradley E. Bernstein, Tarjei S. Mikkelsen, Xiaohui Xie, Michael Kamal, Dana J. Huebert, James Cuff, Ben Fry, Alex Meissner, Marius Wernig, Kathrin Plath, Rudolf Jaenisch, Alexandre Wagschal, Robert Feil, Stuart L. Schreiber, Eric S. Lander, A Bivalent Chromatin Structure Marks Key Developmental Genes in Embryonic Stem Cells Cell. ,vol. 125, pp. 315- 326 ,(2006) , 10.1016/J.CELL.2006.02.041
Anke Sparmann, Maarten van Lohuizen, Polycomb silencers control cell fate, development and cancer Nature Reviews Cancer. ,vol. 6, pp. 846- 856 ,(2006) , 10.1038/NRC1991
T.-Y. Roh, S. Cuddapah, K. Cui, K. Zhao, The genomic landscape of histone modifications in human T cells. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 103, pp. 15782- 15787 ,(2006) , 10.1073/PNAS.0607617103
P. Byvoet, G.R. Shepherd, J.M. Hardin, B.J. Noland, The distribution and turnover of labeled methyl groups in histone fractions of cultured mammalian cells. Archives of Biochemistry and Biophysics. ,vol. 148, pp. 558- 567 ,(1972) , 10.1016/0003-9861(72)90174-9
Simona Saccani, Gioacchino Natoli, Dynamic changes in histone H3 Lys 9 methylation occurring at tightly regulated inducible inflammatory genes Genes & Development. ,vol. 16, pp. 2219- 2224 ,(2002) , 10.1101/GAD.232502
Fei Lan, Peter E. Bayliss, John L. Rinn, Johnathan R. Whetstine, Jordon K. Wang, Shuzhen Chen, Shigeki Iwase, Roman Alpatov, Irina Issaeva, Eli Canaani, Thomas M. Roberts, Howard Y. Chang, Yang Shi, A histone H3 lysine 27 demethylase regulates animal posterior development. Nature. ,vol. 449, pp. 689- 694 ,(2007) , 10.1038/NATURE06192
Francesca De Santa, Maria Grazia Totaro, Elena Prosperini, Samuele Notarbartolo, Giuseppe Testa, Gioacchino Natoli, The Histone H3 Lysine-27 Demethylase Jmjd3 Links Inflammation to Inhibition of Polycomb-Mediated Gene Silencing Cell. ,vol. 130, pp. 1083- 1094 ,(2007) , 10.1016/J.CELL.2007.08.019