Replication and characterisation of genetic variants in the fibrinogen gene cluster with plasma fibrinogen levels and haematological traits in the Third National Health and Nutrition Examination Survey.

作者: Janina M Jeff , Kristin Brown-Gentry , Dana C Crawford , None

DOI: 10.1160/TH11-07-0497

关键词:

摘要: Previous genetic association studies of the fibrinogen gene cluster have identified associations with plasma levels. These are typically limited to measured among European-descent populations. We sought replicate previous well-known variants and fibrinogen. then identify characterise novel several haematological traits in three racial/ethnic genotyped 25 single nucleotide polymorphisms (SNPs) 2,631 non-Hispanic whites, 2,108 blacks, 2,073 Mexican-Americans from Third National Health Nutrition Examination Survey (NHANES). performed SNP tests for fibrinogen, mean platelet volume, distribution width, count, white blood cell serum triglycerides. Five previously replicated our study whites blacks. two between decreased fibrinogen: rs2227395 (p=0.0007; whites) rs2070022 (p=0.001; Mexican-Americans). Several SNPs were also associated traits: rs6050 width whites; rs2066879 increased respectively, whites;rs2227409 rs2070017 rs6063 blacks; rs4220 rs2227409 rs2066860 rs1800792 triclyceride levels, counts Mexican-Americans. successfully data confirm importance levels as well suggest this may pleiotropic effects on traits.

参考文章(40)
Kandice Kottke-Marchant, Genetic polymorphisms associated with venous and arterial thrombosis: an overview. Archives of Pathology & Laboratory Medicine. ,vol. 126, pp. 295- 304 ,(2002) , 10.1043/0003-9985(2002)126<0295:GPAWVA>2.0.CO;2
Marylyn D. Ritchie, Justin Giles, Benjamin J. Grady, Scott M. Dudek, David Sexton, Eric Torstenson, FINDING UNIQUE FILTER SETS IN PLATO: A PRECURSOR TO EFFICIENT INTERACTION ANALYSIS IN GWAS DATA pacific symposium on biocomputing. pp. 315- 326 ,(2010)
Elvira Grandone, Maurizio Margaglione, Population genetics of venous thromboembolism. A narrative review. Thrombosis and Haemostasis. ,vol. 105, pp. 221- 231 ,(2010) , 10.1160/TH10-08-0510
Wayne W. Grody, Molecular Genetic Risk Screening Annual Review of Medicine. ,vol. 54, pp. 473- 490 ,(2003) , 10.1146/ANNUREV.MED.54.101601.152127
David Feinbloom, Kenneth A. Bauer, Assessment of Hemostatic Risk Factors in Predicting Arterial Thrombotic Events Arteriosclerosis, Thrombosis, and Vascular Biology. ,vol. 25, pp. 2043- 2053 ,(2005) , 10.1161/01.ATV.0000181762.31694.DA
Werner Koch, Petra Hoppmann, Janita Biele, Jakob C. Mueller, Albert Schömig, Adnan Kastrati, Fibrinogen Genes and Myocardial Infarction : A Haplotype Analysis Arteriosclerosis, Thrombosis, and Vascular Biology. ,vol. 28, pp. 758- 763 ,(2008) , 10.1161/ATVBAHA.107.157842
Nicole Soranzo, Divya Mehta, Dieter Rosskopf, Peter Lichtner, Norman Klopp, Jonathan Stephens, Nicholas A. Watkins, Panos Deloukas, Andreas Greinacher, Wolfgang Koenig, Matthias Nauck, Christian Rimmbach, Henry Völzke, Annette Peters, Thomas Illig, Willem H. Ouwehand, Thomas Meitinger, H.-Erich Wichmann, Angela Döring, Christa Meisinger, Holger Prokisch, Christian Gieger, A Genome-wide Association Study Identifies Three Loci Associated with Mean Platelet Volume American Journal of Human Genetics. ,vol. 84, pp. 66- 71 ,(2009) , 10.1016/J.AJHG.2008.11.015
Christopher S. Carlson, Michael A. Eberle, Mark J. Rieder, Qian Yi, Leonid Kruglyak, Deborah A. Nickerson, Selecting a Maximally Informative Set of Single-Nucleotide Polymorphisms for Association Analyses Using Linkage Disequilibrium American Journal of Human Genetics. ,vol. 74, pp. 106- 120 ,(2004) , 10.1086/381000