Beyond Complementation. Map-Based Cloning in Chlamydomonas reinhardtii

作者: Linda A. Rymarquis , Jocelyn M. Handley , Mabel Thomas , David B. Stern

DOI: 10.1104/PP.104.054221

关键词:

摘要: Chlamydomonas reinhardtii is an excellent model system for plant biologists because of its ease manipulation, facile genetics, and the ability to transform nuclear, chloroplast, mitochondrial genomes. Numerous forward genetics studies have been performed in Chlamydomonas, many cases elucidate regulation photosynthesis. One resultant challenges moving from mutant phenotype gene mutation causing that phenotype. To date, complementation has primary method cloning, but this impractical several situations, example, when complemented strain cannot be readily selected or case recessive suppressors restore New tools, including a molecular map consisting 506 markers 8X-draft nuclear genome sequence, are now available, making map-based cloning increasingly feasible. Here we discuss advances developed using strains mcd4 mcd5, which carry restoring photosynthesis chloroplast mutants. Tools not previously applied such as bulked segregant analysis marker duplexing, being implemented increase speed at one can go gene. In addition assessing applying current resources, outline anticipated future developments context newly extended initiative.

参考文章(40)
T. A. Karpekina, I. Yu. Stepanenko, E. I. Krylova, A. N. Kozlova, I. M. Gracheva, G. I. El'-Registan, Involvement of microbial alkyl hydroxybenzenes in the regulation of autolytic degradation of yeast cells Microbiology. ,vol. 71, pp. 525- 531 ,(2002) , 10.1023/A:1020598401075
Thomas J Bollenbach, Gadi Schuster, David B Stern, Cooperation of endo- and exoribonucleases in chloroplast mRNA turnover. Progress in Nucleic Acid Research and Molecular Biology. ,vol. 78, pp. 305- 337 ,(2004) , 10.1016/S0079-6603(04)78008-3
David C. Higgs, Risa S. Shapiro, Karen L. Kindle, David B. Stern, Small cis-acting sequences that specify secondary structures in a chloroplast mRNA are essential for RNA stability and translation. Molecular and Cellular Biology. ,vol. 19, pp. 8479- 8491 ,(1999) , 10.1128/MCB.19.12.8479
Charlotte K. Omoto, Erica Frey, Charles J. Brokaw, Reactivation at low ATP distinguishes among classes of paralyzed flagella mutants Cytoskeleton. ,vol. 38, pp. 91- 99 ,(1997) , 10.1002/(SICI)1097-0169(1997)38:1<91::AID-CM8>3.0.CO;2-K
R. Schmidt, J. West, K. Love, Z. Lenehan, C. Lister, H. Thompson, D. Bouchez, C. Dean, Physical Map and Organization of Arabidopsis thaliana Chromosome 4 Science. ,vol. 270, pp. 480- 483 ,(1995) , 10.1126/SCIENCE.270.5235.480
D. S. Gorman, R. P. Levine, Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardi. Proceedings of the National Academy of Sciences of the United States of America. ,vol. 54, pp. 1665- 1669 ,(1965) , 10.1073/PNAS.54.6.1665
Eric Boudreau, Jörg Nickelsen, Stéphane D Lemaire, Friedrich Ossenbühl, Jean-David Rochaix, The Nac2 gene of Chlamydomonas encodes a chloroplast TPR‐like protein involved in psbD mRNA stability The EMBO Journal. ,vol. 19, pp. 3366- 3376 ,(2000) , 10.1093/EMBOJ/19.13.3366
K. K. Niyogi, O. Bjorkman, A. R. Grossman, Chlamydomonas Xanthophyll Cycle Mutants Identified by Video Imaging of Chlorophyll Fluorescence Quenching. The Plant Cell. ,vol. 9, pp. 1369- 1380 ,(1997) , 10.1105/TPC.9.8.1369
Christian H. Gross, Laura P. W. Ranum, Paul A. Lefebvre, Extensive restriction fragment length polymorphisms in a new isolate of Chlamydomonas reinhardtii. Current Genetics. ,vol. 13, pp. 503- 508 ,(1988) , 10.1007/BF02427756