Nutrients drive transcriptional changes that maintain metabolic homeostasis but alter genome architecture in Microcystis

作者: Morgan M Steffen , Stephen P Dearth , Brian D Dill , Zhou Li , Kristen M Larsen

DOI: 10.1038/ISMEJ.2014.78

关键词:

摘要: The cyanobacterium Microcystis aeruginosa is a globally distributed bloom-forming organism that degrades freshwater systems around the world. Factors drive its dispersion, diversification and success remain, however, poorly understood. To develop insight into cellular-level responses to nutrient drivers of eutrophication, RNA sequencing was coupled comprehensive metabolomics survey M. sp. NIES 843 grown in various nutrient-reduced conditions. Transcriptomes were generated for cultures nutrient-replete (with nitrate as nitrogen (N) source), nitrogen-reduced nitrate, urea or ammonium acting N sources) phosphate-reduced Extensive expression differences (up 696 genes urea-grown cells) relative control treatment observed, demonstrating chemical variant available cells affected transcriptional activity. Of particular note, high number transposase 81) significantly reproducibly up-regulated when on urea. Conversely, phosphorus (P) reduction resulted significant cessation transcription genes, indicating variation chemistry may influence transposases impact highly mosaic genomic architecture aeruginosa. Corresponding metabolomes showed comparably few between treatments, suggesting broad changes gene are required maintain metabolic homeostasis under reduction. combined observations provide novel extensive complex cellular interactions take place this important during variable conditions highlight potential unknown molecular mechanism blooms evolution.

参考文章(61)
Louie L. Wurch, Sheean T. Haley, Elizabeth D. Orchard, Christopher J. Gobler, Sonya T. Dyhrman, Nutrient-regulated transcriptional responses in the brown tide-forming alga Aureococcus anophagefferens. Environmental Microbiology. ,vol. 13, pp. 468- 481 ,(2011) , 10.1111/J.1462-2920.2010.02351.X
Lin Chao, Christopher Vargas, Brian B. Spear, Edward C. Cox, Transposable elements as mutator genes in evolution Nature. ,vol. 303, pp. 633- 635 ,(1983) , 10.1038/303633A0
Walter K. Dodds, Wes W. Bouska, Jeffrey L. Eitzmann, Tyler J. Pilger, Kristen L. Pitts, Alyssa J. Riley, Joshua T. Schloesser, Darren J. Thornbrugh, Eutrophication of U.S. freshwaters: analysis of potential economic damages. Environmental Science & Technology. ,vol. 43, pp. 12- 19 ,(2009) , 10.1021/ES801217Q
Johanna M. Rinta-Kanto, Elisabeth A. Konopko, Jennifer M. DeBruyn, Richard A. Bourbonniere, Gregory L. Boyer, Steven W. Wilhelm, Lake Erie Microcystis: Relationship between microcystin production, dynamics of genotypes and environmental parameters in a large lake Harmful Algae. ,vol. 8, pp. 665- 673 ,(2009) , 10.1016/J.HAL.2008.12.004
Matthew J. Harke, Dianna L. Berry, James W. Ammerman, Christopher J. Gobler, Molecular Response of the Bloom-Forming Cyanobacterium, Microcystis aeruginosa, to Phosphorus Limitation Microbial Ecology. ,vol. 63, pp. 188- 198 ,(2012) , 10.1007/S00248-011-9894-8
Amber M. Hotto, Mike F. Satchwell, Dianna L. Berry, Christopher J. Gobler, Gregory L. Boyer, Spatial and temporal diversity of microcystins and microcystin-producing genotypes in Oneida Lake, NY Harmful Algae. ,vol. 7, pp. 671- 681 ,(2008) , 10.1016/J.HAL.2008.02.001
C. J. Gobler, D. L. Berry, S. T. Dyhrman, S. W. Wilhelm, A. Salamov, A. V. Lobanov, Y. Zhang, J. L. Collier, L. L. Wurch, A. B. Kustka, B. D. Dill, M. Shah, N. C. VerBerkmoes, A. Kuo, A. Terry, J. Pangilinan, E. A. Lindquist, S. Lucas, I. T. Paulsen, T. K. Hattenrath-Lehmann, S. C. Talmage, E. A. Walker, F. Koch, A. M. Burson, M. A. Marcoval, Y.-Z. Tang, G. R. LeCleir, K. J. Coyne, G. M. Berg, E. M. Bertrand, M. A. Saito, V. N. Gladyshev, I. V. Grigoriev, Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics Proceedings of the National Academy of Sciences of the United States of America. ,vol. 108, pp. 4352- 4357 ,(2011) , 10.1073/PNAS.1016106108
Andrew M. Dolman, Jacqueline Rücker, Frances R. Pick, Jutta Fastner, Thomas Rohrlack, Ute Mischke, Claudia Wiedner, Cyanobacteria and Cyanotoxins: The Influence of Nitrogen versus Phosphorus PLoS ONE. ,vol. 7, pp. e38757- ,(2012) , 10.1371/JOURNAL.PONE.0038757