PIWI-Interacting RNA in Drosophila: Biogenesis, Transposon Regulation, and Beyond

作者: Haruna Yamashiro , Mikiko C. Siomi

DOI: 10.1021/ACS.CHEMREV.7B00393

关键词:

摘要: PIWI-interacting RNAs (piRNAs) are germline-enriched small that control transposons to maintain genome integrity. To achieve this, upon being processed from piRNA precursors, most of which transcripts intergenic clusters, piRNAs bind PIWI proteins, germline-specific Argonaute form effector complexes. The mechanism this piRNA-mediated transposon silencing pathway is fundamentally similar siRNA/miRNA-dependent gene in a RNA guides its partner protein target for repression via RNA–RNA base pairing. However, the uniqueness has emerged through intensive genetic, biochemical, bioinformatic, and structural investigations. Here, we review studies elucidated pathway, mainly Drosophila, by describing both historical recent progress. Studies other species have made important contributions field also described.

参考文章(215)
Yukiko Murota, Hirotsugu Ishizu, Shinichi Nakagawa, Yuka W. Iwasaki, Shinsuke Shibata, Miharu K. Kamatani, Kuniaki Saito, Hideyuki Okano, Haruhiko Siomi, Mikiko C. Siomi, Yb Integrates piRNA Intermediates and Processing Factors into Perinuclear Bodies to Enhance piRISC Assembly Cell Reports. ,vol. 8, pp. 103- 113 ,(2014) , 10.1016/J.CELREP.2014.05.043
René F Ketting, Sylvia EJ Fischer, Emily Bernstein, Titia Sijen, Gregory J Hannon, Ronald HA Plasterk, Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans Genes & Development. ,vol. 15, pp. 2654- 2659 ,(2001) , 10.1101/GAD.927801
Alain Pélisson, Emeline Sarot, Geneviève Payen-Groschêne, Alain Bucheton, A Novel Repeat-Associated Small Interfering RNA-Mediated Silencing Pathway Downregulates Complementary Sense gypsy Transcripts in Somatic Cells of the Drosophila Ovary Journal of Virology. ,vol. 81, pp. 1951- 1960 ,(2007) , 10.1128/JVI.01980-06
K. M. Nishida, K. Saito, T. Mori, Y. Kawamura, T. Nagami-Okada, S. Inagaki, H. Siomi, M. C. Siomi, Gene silencing mechanisms mediated by Aubergine piRNA complexes in Drosophila male gonad. RNA. ,vol. 13, pp. 1911- 1922 ,(2007) , 10.1261/RNA.744307
Alla I Kalmykova, Mikhail S Klenov, Vladimir A Gvozdev, Argonaute protein PIWI controls mobilization of retrotransposons in the Drosophila male germline Nucleic Acids Research. ,vol. 33, pp. 2052- 2059 ,(2005) , 10.1093/NAR/GKI323
Maryvonne Mével-Ninio, Alain Pelisson, Jennifer Kinder, Ana Regina Campos, Alain Bucheton, The flamenco locus controls the gypsy and ZAM retroviruses and is required for Drosophila oogenesis. Genetics. ,vol. 175, pp. 1615- 1624 ,(2007) , 10.1534/GENETICS.106.068106
N. V. Rozhkov, M. Hammell, G. J. Hannon, Multiple roles for Piwi in silencing Drosophila transposons Genes & Development. ,vol. 27, pp. 400- 412 ,(2013) , 10.1101/GAD.209767.112
Robert W Hardy, Dan L Lindsley, Kenneth J Livak, Barbara Lewis, Annegrethe L Siversten, Geoffrey L Joslyn, Jacqueline Edwards, Silvia Bonaccorsi, Cytogenetic analysis of a segment of the Y chromosome of Drosophila melanogaster. Genetics. ,vol. 107, pp. 591- 610 ,(1984) , 10.1093/GENETICS/107.4.591
Jingjing Zhang, Qian Wang, Mingsong Wang, Manxi Jiang, Yongsheng Wang, Yun Sun, Junpeng Wang, Taorong Xie, Chao Tang, Nannan Tang, Huili Song, Di Cui, Ruihua Chao, Shuzhe Ding, Bing Ni, Xuejin Chen, Yuan Wang, GASZ and mitofusin-mediated mitochondrial functions are crucial for spermatogenesis. EMBO Reports. ,vol. 17, pp. 220- 234 ,(2016) , 10.15252/EMBR.201540846
Y. Yu, J. Gu, Y. Jin, Y. Luo, J. B. Preall, J. Ma, B. Czech, G. J. Hannon, Panoramix enforces piRNA-dependent cotranscriptional silencing. Science. ,vol. 350, pp. 339- 342 ,(2015) , 10.1126/SCIENCE.AAB0700