Evaluation of a simplified IS6110 PCR for the rapid diagnosis of Mycobacterium tuberculosis in an area with high tuberculosis incidence

作者: I. Ben Kahla , W. Ben Selma , M. Marzouk , A. Ferjeni , S. Ghezal

DOI: 10.1016/J.PATBIO.2009.04.001

关键词:

摘要: Abstract Purpose To assess the diagnostic yield of a simplified IS6110-PCR in an area with high tuberculosis incidence. Methods Pulmonary (218) and extrapulmonary (121) samples were collected from 236 patients including smearpositive leprosy patients. All processed to detect acidfast bacilli by microscopy, culture on solid media PCR. remove PCR inhibitors, three washing steps decontaminated pellet included before mycobacterial cell lysis heat treatment. No detergents, enzymes, or chelating agents used. From 339 samples, 34 selected basing their large volume tested commercial kit GenoType Mycobacteria Direct (GTMD) (VER 4, Hain Lifescience, Germany) addition tests cited above. Results The overall sensitivity specificity 93.8 98.6% for pulmonary 63.6 100% respectively. assay detected MTC 94.2% smear positive predictive value 100%. inhibition was found among seven that negative but bacteriological confirmed as containing Mycobacterium . false result occurred sensitivities GTMD 81.8 75%, Conclusion could efficiently complement conventional tools rapid diagnosis cannot replace them.

参考文章(20)
Deborah R. Howard, William E. Keating, Adriann H. Walters, Michael C. Little, James A. Down, Margaret S. Dey, Sample processing method for Mycobacterium tuberculosis ,(1994)
D De Wit, L Steyn, S Shoemaker, M Sogin, Direct detection of Mycobacterium tuberculosis in clinical specimens by DNA amplification. Journal of Clinical Microbiology. ,vol. 28, pp. 2437- 2441 ,(1990) , 10.1128/JCM.28.11.2437-2441.1990
A. Panduro, S. L. Morris, L. Portillo-Gómez, Rapid and efficient detection of extra-pulmonary Mycobacterium tuberculosis by PCR analysis. International Journal of Tuberculosis and Lung Disease. ,vol. 4, pp. 361- 370 ,(2000)
G T Noordhoek, A H Kolk, G Bjune, D Catty, J W Dale, P E Fine, P Godfrey-Faussett, S N Cho, T Shinnick, S B Svenson, Sensitivity and specificity of PCR for detection of Mycobacterium tuberculosis: a blind comparison study among seven laboratories. Journal of Clinical Microbiology. ,vol. 32, pp. 277- 284 ,(1994) , 10.1128/JCM.32.2.277-284.1994
W. K. Aldous, J. I. Pounder, J. L. Cloud, G. L. Woods, Comparison of Six Methods of Extracting Mycobacterium tuberculosis DNA from Processed Sputum for Testing by Quantitative Real-Time PCR Journal of Clinical Microbiology. ,vol. 43, pp. 2471- 2473 ,(2005) , 10.1128/JCM.43.5.2471-2473.2005
F. Franco-Alvarez de Luna, P. Ruiz, J. Gutierrez, M. Casal, Evaluation of the GenoType Mycobacteria Direct Assay for Detection of Mycobacterium tuberculosis Complex and Four Atypical Mycobacterial Species in Clinical Samples Journal of Clinical Microbiology. ,vol. 44, pp. 3025- 3027 ,(2006) , 10.1128/JCM.00068-06
VCC Cheng, WC Yam, IFN Hung, PCY Woo, SKP Lau, BSF Tang, KY Yuen, Clinical evaluation of the polymerase chain reaction for the rapid diagnosis of tuberculosis Journal of Clinical Pathology. ,vol. 57, pp. 281- 285 ,(2004) , 10.1136/JCP.2003.012658
G T Noordhoek, J A Kaan, S Mulder, H Wilke, A H Kolk, Routine application of the polymerase chain reaction for detection of Mycobacterium tuberculosis in clinical samples. Journal of Clinical Pathology. ,vol. 48, pp. 810- 814 ,(1995) , 10.1136/JCP.48.9.810
S Gupta, SF Basir, S Khare, S Lal, SS Negi, R Anand, ST Pasha, DIAGNOSTIC POTENTIAL OF IS6110, 38KDA, 65KDA AND 85B SEQUENCE-BASED POLYMERASE CHAIN REACTION IN THE DIAGNOSIS OF MYCOBACTERIUM TUBERCULOSIS IN CLINICAL SAMPLES Indian Journal of Medical Microbiology. ,vol. 25, pp. 43- 49 ,(2007) , 10.4103/0255-0857.31061
Payam Nahid, Madhukar Pai, Philip C Hopewell, Advances in the diagnosis and treatment of tuberculosis. Proceedings of the American Thoracic Society. ,vol. 3, pp. 103- 110 ,(2006) , 10.1513/PATS.200511-119JH