Genetic analyses benefit from using less heterogeneous phenotypes: an illustration with the hospital anxiety and depression scale (HADS).

作者: Charles A. Laurin , Jouke-Jan Hottenga , Gonneke Willemsen , Dorret I. Boomsma , Gitta H. Lubke

DOI: 10.1002/GEPI.21897

关键词:

摘要: Phenotypic heterogeneity of depression has been cited as one the causes limited success to detect genetic variants in genome-wide studies. The 7-item Hospital Anxiety and Depression Scale (HADS-D) was developed individuals with physical health problems. An initial psychometric analysis showed that a short version ("HADS-4") is less heterogeneous hence more reliable than full scale, correlates equally strong DSM-oriented scale. We compared HADS-D HADS-4 assess benefits using phenotype measures analyses. three separate analyses: (1) twin- family-based heritability estimation, (2) SNP-based estimation software GCTA, (3) association study (GWAS). twin resulted estimates between 18% 25%, additive variance being largest component. There also evidence for assortative mating dominance component variance, having slightly lower assortment. Importantly, when estimating from SNPs, did not show significant component, while HADS-4, statistically amount estimated. Moreover, had substantially SNPs small P-values GWAS HADS-D. Our results underline homogeneous phenotypes psychiatric Homogeneity can be increased by focusing on core symptoms disorders, thus reducing noise aggregate caused different symptom profiles.

参考文章(49)
Doug Speed, Gibran Hemani, Michael R. Johnson, David J. Balding, Improved Heritability Estimation from Genome-wide SNPs American Journal of Human Genetics. ,vol. 91, pp. 1011- 1021 ,(2012) , 10.1016/J.AJHG.2012.10.010
C C Minică, D I Boomsma, J M Vink, C V Dolan, MZ twin pairs or MZ singletons in population family-based GWAS? More power in pairs Molecular Psychiatry. ,vol. 19, pp. 1154- 1155 ,(2014) , 10.1038/MP.2014.121
Gonneke Willemsen, Jacqueline M. Vink, Abdel Abdellaoui, Anouk den Braber, Jenny H. D. A. van Beek, Harmen H. M. Draisma, Jenny van Dongen, Dennis van ‘t Ent, Lot M. Geels, Rene van Lien, Lannie Ligthart, Mathijs Kattenberg, Hamdi Mbarek, Marleen H. M. de Moor, Melanie Neijts, Rene Pool, Natascha Stroo, Cornelis Kluft, H. Eka D. Suchiman, P. Eline Slagboom, Eco J. C. de Geus, Dorret I. Boomsma, The adult Netherlands twin register: Twenty-five years of survey and biological data collection Twin Research and Human Genetics. ,vol. 16, pp. 271- 281 ,(2013) , 10.1017/THG.2012.140
Robert L Jackson, Barbara Hunt, Patricia A MacDonald, The efficacy and safety of febuxostat for urate lowering in gout patients ≥65 years of age BMC Geriatrics. ,vol. 12, pp. 11- 11 ,(2012) , 10.1186/1471-2318-12-11
Douglas F. Levinson, Sara Mostafavi, Yuri Milaneschi, Margarita Rivera, Stephan Ripke, Naomi R. Wray, Patrick F. Sullivan, Genetic studies of major depressive disorder: why are there no genome-wide association study findings and what can we do about it? Biological Psychiatry. ,vol. 76, pp. 510- 512 ,(2014) , 10.1016/J.BIOPSYCH.2014.07.029
Jacob Gratten, Naomi R Wray, Matthew C Keller, Peter M Visscher, Large-scale genomics unveils the genetic architecture of psychiatric disorders Nature Neuroscience. ,vol. 17, pp. 782- 790 ,(2014) , 10.1038/NN.3708
Frank Dudbridge, Power and Predictive Accuracy of Polygenic Risk Scores PLoS Genetics. ,vol. 9, pp. e1003348- ,(2013) , 10.1371/JOURNAL.PGEN.1003348
Gitta H. Lubke, Jouke Jan Hottenga, Raymond Walters, Charles Laurin, Eco J.C. de Geus, Gonneke Willemsen, Jan H. Smit, Christel M. Middeldorp, Brenda W.J.H. Penninx, Jacqueline M. Vink, Dorret I. Boomsma, Estimating the Genetic Variance of Major Depressive Disorder Due to All Single Nucleotide Polymorphisms Biological Psychiatry. ,vol. 72, pp. 707- 709 ,(2012) , 10.1016/J.BIOPSYCH.2012.03.011
Thomas M Achenbach, Amit Bernstein, Levent Dumenci, None, DSM-oriented scales and statistically based syndromes for ages 18 to 59: linking taxonomic paradigms to facilitate multitaxonomic approaches. Journal of Personality Assessment. ,vol. 84, pp. 49- 63 ,(2005) , 10.1207/S15327752JPA8401_10
Karin Hek, Ayse Demirkan, Jari Lahti, Antonio Terracciano, Alexander Teumer, Marilyn C Cornelis, Najaf Amin, Erin Bakshis, Jens Baumert, Jingzhong Ding, Yongmei Liu, Kristin Marciante, Osorio Meirelles, Michael A Nalls, Yan V Sun, Nicole Vogelzangs, Lei Yu, Stefania Bandinelli, Emelia J Benjamin, David A Bennett, Dorret Boomsma, Alessandra Cannas, Laura H Coker, Eco De Geus, Philip L De Jager, Ana V Diez-Roux, Shaun Purcell, Frank B Hu, Eric B Rimm, David J Hunter, Majken K Jensen, Gary Curhan, Kenneth Rice, Alan D Penman, Jerome I Rotter, Nona Sotoodehnia, Rebecca Emeny, Johan G Eriksson, Denis A Evans, Luigi Ferrucci, Myriam Fornage, Vilmundur Gudnason, Albert Hofman, Thomas Illig, Sharon Kardia, Margaret Kelly-Hayes, Karestan Koenen, Peter Kraft, Maris Kuningas, Joseph M Massaro, David Melzer, Antonella Mulas, Cornelis L Mulder, Anna Murray, Ben A Oostra, Aarno Palotie, Brenda Penninx, Astrid Petersmann, Luke C Pilling, Bruce Psaty, Rajesh Rawal, Eric M Reiman, Andrea Schulz, Joshua M Shulman, Andrew B Singleton, Albert V Smith, Angelina R Sutin, André G Uitterlinden, Henry Völzke, Elisabeth Widen, Kristine Yaffe, Alan B Zonderman, Francesco Cucca, Tamara Harris, Karl-Heinz Ladwig, David J Llewellyn, Katri Räikkönen, Toshiko Tanaka, Cornelia M Van Duijn, Hans J Grabe, Lenore J Launer, Kathryn L Lunetta, Thomas H Mosley Jr, Anne B Newman, Henning Tiemeier, Joanne Murabito, None, A Genome-Wide Association Study of Depressive Symptoms Biological Psychiatry. ,vol. 73, pp. 667- 678 ,(2013) , 10.1016/J.BIOPSYCH.2012.09.033