Villi development core-related gene expression associated with lung squamous cancer prognosis.

作者: Liyuan Yin , Yonggang Wang , Guangzhi Ma , Yunfu Deng , Qinghua Zhou

DOI: 10.1097/MD.0000000000014714

关键词:

摘要: Similarities between embryonic development and tumorigenesis are reflected in biological behavior gene expression. Although the signature during clinical phenotype of different cancers show certain correlation pattern, early embryo cancer remains largely unexplored. To compare expression profile cancer, our study analyzed chorionic villi samples at gestational ages (6, 7, 8, 9, 10, 40 weeks) obtained from omnibus (GEO) datasets using test. Then development-related genes that gradually showed a positive (upregulated) (n = 394) or negative (downregulated) (n = 325) with time were used to construct protein-protein interaction (PPI) networks. Three subnetworks among upregulated 3 downregulated identified molecular complex detection (MCODE) plugin Cytoscape software. The most significant GO terms for villi-correlated immune, inflammatory response cell division. These clusters also dysregulated lung squamous carcinoma (SCC). Moreover prognostic value was then TCGA SCC data, which 4 associated prognosis. Our results demonstrate similarity development-associated could contain information patients.

参考文章(36)
Run Tong, Lin Feng, Lei Zhang, Jianzhi Zhang, Yousheng Mao, Kaitai Zhang, Yanning Gao, Guiqi Wang, Shujun Cheng, Decreased Interferon Alpha/Beta Signature Associated with Human Lung Tumorigenesis. Journal of Interferon and Cytokine Research. ,vol. 35, pp. 963- 968 ,(2015) , 10.1089/JIR.2015.0061
Jo K. Perry, Roger J. Lins, Peter E. Lobie, Murray D. Mitchell, Regulation of invasive growth: similar epigenetic mechanisms underpin tumour progression and implantation in human pregnancy Clinical Science. ,vol. 118, pp. 451- 457 ,(2010) , 10.1042/CS20090503
Fei-Fei Kong, You-Long Zhu, Hai-Hua Yuan, Jiong-Yi Wang, Mei Zhao, Xiao-Di Gong, Feng Liu, Wen-Ying Zhang, Cong-Rong Wang, Bin Jiang, FOXM1 regulated by ERK pathway mediates TGF-β1-induced EMT in NSCLC. Oncology Research. ,vol. 22, pp. 29- 37 ,(2014) , 10.3727/096504014X14078436004987
Stephanie B. Greene, Jason I. Herschkowitz, Jeffrey M. Rosen, The ups and downs of miR-205: identifying the roles of miR-205 in mammary gland development and breast cancer. RNA Biology. ,vol. 7, pp. 300- 304 ,(2010) , 10.4161/RNA.7.3.11837
Abel Sanchez-Palencia, Mercedes Gomez-Morales, Jose Antonio Gomez-Capilla, Vicente Pedraza, Laura Boyero, Rafael Rosell, Mª Esther Fárez-Vidal, Gene expression profiling reveals novel biomarkers in nonsmall cell lung cancer International Journal of Cancer. ,vol. 129, pp. 355- 364 ,(2011) , 10.1002/IJC.25704
Yanlei Ma, Peng Zhang, Feng Wang, Jianjun Yang, Zhe Yang, Huanlong Qin, The relationship between early embryo development and tumourigenesis Journal of Cellular and Molecular Medicine. ,vol. 14, pp. 2697- 2701 ,(2010) , 10.1111/J.1582-4934.2010.01191.X
Lin Feng, Jiamei Wang, Bangrong Cao, Yi Zhang, Bo Wu, Xuebing Di, Wei Jiang, Ning An, Dan Lu, Suhong Gao, Yuda Zhao, Zhaoli Chen, Yousheng Mao, Yanning Gao, Deshan Zhou, Jin Jen, Xiaohong Liu, Yunping Zhang, Xia Li, Kaitai Zhang, Jie He, Shujun Cheng, None, Gene Expression Profiling in Human Lung Development: An Abundant Resource for Lung Adenocarcinoma Prognosis PLoS ONE. ,vol. 9, pp. e105639- ,(2014) , 10.1371/JOURNAL.PONE.0105639
Laura Ridolfi, Massimiliano Petrini, Laura Fiammenghi, Angela Riccobon, Ruggero Ridolfi, Human embryo immune escape mechanisms rediscovered by the tumor. Immunobiology. ,vol. 214, pp. 61- 76 ,(2009) , 10.1016/J.IMBIO.2008.03.003
Samir Kumar Patra, Moonmoon Deb, Aditi Patra, Molecular marks for epigenetic identification of developmental and cancer stem cells. Clinical Epigenetics. ,vol. 2, pp. 27- 53 ,(2011) , 10.1007/S13148-010-0016-0