A compound poisson process for relaxing the molecular clock.
作者： David Swofford , John P. Huelsenbeck , Bret Larget
DOI: 10.1093/GENETICS/154.4.1879
关键词:
摘要: … compound Poisson process discussed in this article places events of substitution-rate change on the tree according to a Poisson process. … (m) by a gamma-distributed random variable (…
genetics.org
oup.com参考文章(24)
THOMAS H. JUKES, CHARLES R. CANTOR, CHAPTER 24 – Evolution of Protein Molecules Mammalian Protein Metabolism#R##N#Volume III. pp. 21- 132 ,(1969) , 10.1016/B978-1-4832-3211-9.50009-7
EMILE ZUCKERKANDL, LINUS PAULING, Evolutionary Divergence and Convergence in Proteins Evolving Genes and Proteins#R##N#A Symposium Held at the Institute of Microbiology of Rutgers: the State University with Support from the National Science Foundation. pp. 97- 166 ,(1965) , 10.1016/B978-1-4832-2734-4.50017-6
Sudhir Kumar, S Blair Hedges, None, A molecular timescale for vertebrate evolution Nature. ,vol. 392, pp. 917- 920 ,(1998) , 10.1038/31927
Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites. Molecular Biology and Evolution. ,vol. 10, pp. 1396- 1401 ,(1993) , 10.1093/OXFORDJOURNALS.MOLBEV.A040082
M. J. Sanderson, A Nonparametric Approach to Estimating Divergence Times in the Absence of Rate Constancy Molecular Biology and Evolution. ,vol. 14, pp. 1218- 1231 ,(1997) , 10.1093/OXFORDJOURNALS.MOLBEV.A025731
R. F. Doolittle, D.-F. Feng, S. Tsang, G. Cho, E. Little, Determining Divergence Times of the Major Kingdoms of Living Organisms with a Protein Clock Science. ,vol. 271, pp. 470- 477 ,(1996) , 10.1126/SCIENCE.271.5248.470
John P. Huelsenbeck, Bruce Rannala, Ziheng Yang, STATISTICAL TESTS OF HOST-PARASITE COSPECIATION Evolution. ,vol. 51, pp. 410- 419 ,(1997) , 10.1111/J.1558-5646.1997.TB02428.X
Chung-I Wu, Wen-Hsiung Li, Evidence for higher rates of nucleotide substitution in rodents than in man Proceedings of the National Academy of Sciences of the United States of America. ,vol. 82, pp. 1741- 1745 ,(1985) , 10.1073/PNAS.82.6.1741
Masami Hasegawa, Hirohisa Kishino, Taka-aki Yano, Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution. ,vol. 22, pp. 160- 174 ,(1985) , 10.1007/BF02101694
Morris Goodman, G. William Moore, Genji Matsuda, Darwinian evolution in the genealogy of haemoglobin. Nature. ,vol. 253, pp. 603- 608 ,(1975) , 10.1038/253603A0