Oligomerization and nanocluster organization render specificity

作者: Ruth Nussinov , Hyunbum Jang , Chung-Jung Tsai

DOI: 10.1111/BRV.12124

关键词:

摘要: Nanoclusters are anchored to membranes, either within them or in the cytoplasm latched onto cytoskeleton, whose reorganization can regulate their activity. have been viewed terms of cooperativity and activation; here we perceive nanocluster organization from a conformational standpoint. This leads us suggest that while single molecules encode activity, nanoclusters induce specificity, this is main evolutionary aim. Distinct, isoform-specific drive preferred effector (and ligand) interactions thereby designate signalling pathways. The absence detailed structural information across nanocluster, due size dynamics, hinders an in-depth grasp its mechanistic features; however, available data already capture some principles functional ‘raison d'etre’. Collectively, clustering lends stability reduces likelihood proteolytic cleavage; it also increases effective local concentration enables efficient cooperative activation. However, does not determine ability molecule function. Drugs targeting attenuate activity by hampering cooperativity; may perturb activation signalling, which originate themselves, as such, likely endure. What then major role nanoclustering? Assuming evolved first, with subsequent increase cellular complexity emergence highly similar isoform variants, evolution faced threat promiscuity. We reason potential risk was thwarted oligomerization clustering; confers higher concomitant extra layer control. In our Ras example, will be more accurate dimer than monomer, where isomer specificity could compromised.

参考文章(85)
Kai Simons, Derek Toomre, Lipid rafts and signal transduction Nature Reviews Molecular Cell Biology. ,vol. 1, pp. 31- 39 ,(2000) , 10.1038/35036052
Dennis Bray, Matthew D. Levin, Carl J. Morton-Firth, Receptor clustering as a cellular mechanism to control sensitivity Nature. ,vol. 393, pp. 85- 88 ,(1998) , 10.1038/30018
S. Ghosh, W.Q. Xie, A.F. Quest, G.M. Mabrouk, J.C. Strum, R.M. Bell, The cysteine-rich region of raf-1 kinase contains zinc, translocates to liposomes, and is adjacent to a segment that binds GTP-ras Journal of Biological Chemistry. ,vol. 269, pp. 10000- 10007 ,(1994) , 10.1016/S0021-9258(17)36981-8
Jasminka Omerovic, Ian A. Prior, Compartmentalized signalling: Ras proteins and signalling nanoclusters FEBS Journal. ,vol. 276, pp. 1817- 1825 ,(2009) , 10.1111/J.1742-4658.2009.06928.X
Ziv Reich, J. Jay Boniface, Daniel S. Lyons, Nina Borochov, Ellen J. Wachtel, Mark M. Davis, Ligand-specific oligomerization of T-cell receptor molecules Nature. ,vol. 387, pp. 617- 620 ,(1997) , 10.1038/42500
Subramaniam Malarkannan, Aradhana Awasthi, Kamalakannan Rajasekaran, Pawan Kumar, Kristina M. Schuldt, Allison Bartoszek, Niranjan Manoharan, Nicholas K. Goldner, Colleen M. Umhoefer, Monica S. Thakar, IQGAP1: A Regulator of Intracellular Spacetime Relativity Journal of Immunology. ,vol. 188, pp. 2057- 2063 ,(2012) , 10.4049/JIMMUNOL.1102439
Chung-Jung Tsai, Antonio del Sol, Ruth Nussinov, Protein allostery, signal transmission and dynamics: a classification scheme of allosteric mechanisms Molecular BioSystems. ,vol. 5, pp. 207- 216 ,(2009) , 10.1039/B819720B
Chiara Nicolini, Jörg Baranski, Stefanie Schlummer, José Palomo, Maria Lumbierres-Burgues, Martin Kahms, Jürgen Kuhlmann, Susana Sanchez, Enrico Gratton, Herbert Waldmann, Roland Winter, Visualizing Association of N-Ras in Lipid Microdomains:  Influence of Domain Structure and Interfacial Adsorption Journal of the American Chemical Society. ,vol. 128, pp. 192- 201 ,(2006) , 10.1021/JA055779X
Ruth Nussinov, Buyong Ma, Chung-Jung Tsai, Peter Csermely, Allosteric Conformational Barcodes Direct Signaling in the Cell Structure. ,vol. 21, pp. 1509- 1521 ,(2013) , 10.1016/J.STR.2013.06.002