Absence of Common Somatic Alterations in Genes on 1p and 19q in Oligodendrogliomas

作者: Linda B. Bralten , Stephan Nouwens , Christel Kockx , Lale Erdem , Casper C. Hoogenraad

DOI: 10.1371/JOURNAL.PONE.0022000

关键词:

摘要: A common and histologically well defined subtype of glioma are the oligodendroglial brain tumors. Approximately 70% all oligodendrogliomas have a combined loss entire 1p 19q chromosomal arms. This remarkably high frequency suggests that remaining arms harbor yet to be identified tumor suppressor genes. Identification these causal genetic changes in is important because they form direct targets for treatment. In this study we therefore performed targeted resequencing exons, microRNAs, splice sites promoter regions residing on 7 4 matched controls. Only one missense mutation was single sample ARHGEF16 gene. lies within- disrupts conserved PDZ binding domain. No similar mutations or deletions were found larger set oligodendrogliomas. The absence somatic within genes located three out four samples indicates no additional "second hit" required drive oncogenic transformation either arm.

参考文章(34)
Hiroko Ohgaki, Paul Kleihues, Population-based studies on incidence, survival rates, and genetic alterations in astrocytic and oligodendroglial gliomas. Journal of Neuropathology and Experimental Neurology. ,vol. 64, pp. 479- 489 ,(2005) , 10.1093/JNEN/64.6.479
Brian Thiessen, John A. Maguire, Kelly McNeil, David Huntsman, Montgomery A. Martin, Doug Horsman, Loss of heterozygosity for loci on chromosome arms 1p and 10q in oligodendroglial tumors: relationship to outcome and chemosensitivity. Journal of Neuro-oncology. ,vol. 64, pp. 271- 278 ,(2003) , 10.1023/A:1025689004046
Junko Hirato, Keisuke Ueki, Takamitsu Fujimaki, Takaaki Kirino, Takafumi Ide, Nobuaki Funada, Ryo Nishikawa, Akitake Mukasa, Takanori Hirose, Masaaki Usui, Shuntaro Hojo, Yoichi Nakazato, Shoichi Ito, Akio Asai, Osami Kubo, Chikayuki Ochiai, Hiroshi Takahashi, Correlation of histology and molecular genetic analysis of 1p, 19q, 10q, TP53, EGFR, CDK4, and CDKN2A in 91 astrocytic and oligodendroglial tumors Clinical Cancer Research. ,vol. 8, pp. 196- 201 ,(2002)
Manel Esteller, Epigenetics in Cancer The New England Journal of Medicine. ,vol. 358, pp. 1148- 1159 ,(2008) , 10.1056/NEJMRA072067
Linda B. C. Bralten, Nanne K. Kloosterhof, Lonneke A. M. Gravendeel, Andrea Sacchetti, Elza J. Duijm, Johan M. Kros, Martin J. van den Bent, Casper C. Hoogenraad, Peter A. E. Sillevis Smitt, Pim J. French, Integrated genomic profiling identifies candidate genes implicated in glioma-genesis and a novel LEO1-SLC12A1 fusion gene. Genes, Chromosomes and Cancer. ,vol. 49, pp. 509- 517 ,(2010) , 10.1002/GCC.20760
A. Bagchi, A. A. Mills, The quest for the 1p36 tumor suppressor. Cancer Research. ,vol. 68, pp. 2551- 2556 ,(2008) , 10.1158/0008-5472.CAN-07-2095
Markus J. Riemenschneider, Julia Reifenberger, Guido Reifenberger, Frequent biallelic inactivation and transcriptional silencing of the DIRAS3 gene at 1p31 in oligodendroglial tumors with 1p loss. International Journal of Cancer. ,vol. 122, pp. 2503- 2510 ,(2008) , 10.1002/IJC.23409
J. Gregory Cairncross, Keisuke Ueki, Magdelena C. Zlatescu, David K. Lisle, Dianne M. Finkelstein, Robert R. Hammond, Jonathan S. Silver, Paul C. Stark, David R. Macdonald, Yasushi Ino, David A. Ramsay, David N. Louis, Specific Genetic Predictors of Chemotherapeutic Response and Survival in Patients With Anaplastic Oligodendrogliomas Journal of the National Cancer Institute. ,vol. 90, pp. 1473- 1479 ,(1998) , 10.1093/JNCI/90.19.1473
Christopher Greenman, Philip Stephens, Raffaella Smith, Gillian L. Dalgliesh, Christopher Hunter, Graham Bignell, Helen Davies, Jon Teague, Adam Butler, Claire Stevens, Sarah Edkins, Sarah O’Meara, Imre Vastrik, Esther E. Schmidt, Tim Avis, Syd Barthorpe, Gurpreet Bhamra, Gemma Buck, Bhudipa Choudhury, Jody Clements, Jennifer Cole, Ed Dicks, Simon Forbes, Kris Gray, Kelly Halliday, Rachel Harrison, Katy Hills, Jon Hinton, Andy Jenkinson, David Jones, Andy Menzies, Tatiana Mironenko, Janet Perry, Keiran Raine, Dave Richardson, Rebecca Shepherd, Alexandra Small, Calli Tofts, Jennifer Varian, Tony Webb, Sofie West, Sara Widaa, Andy Yates, Daniel P. Cahill, David N. Louis, Peter Goldstraw, Andrew G. Nicholson, Francis Brasseur, Leendert Looijenga, Barbara L. Weber, Yoke-Eng Chiew, Anna deFazio, Mel F. Greaves, Anthony R. Green, Peter Campbell, Ewan Birney, Douglas F. Easton, Georgia Chenevix-Trench, Min-Han Tan, Sok Kean Khoo, Bin Tean Teh, Siu Tsan Yuen, Suet Yi Leung, Richard Wooster, P. Andrew Futreal, Michael R. Stratton, Patterns of somatic mutation in human cancer genomes Nature. ,vol. 446, pp. 153- 158 ,(2007) , 10.1038/NATURE05610