N‐terminal acetylome analysis reveals the specificity of Naa50 (Nat5) and suggests a kinetic competition between N‐terminal acetyltransferases and methionine aminopeptidases

作者: Petra Van Damme , Kristine Hole , Kris Gevaert , Thomas Arnesen

DOI: 10.1002/PMIC.201400575

关键词:

摘要: Cotranslational N-terminal (Nt-) acetylation of nascent polypeptides is mediated by acetyltransferases (NATs). The very amino acid sequence largely determines whether or not a given protein Nt-acetylated. Currently, there are six distinct NATs characterized, NatA-NatF, in humans which the vivo substrate specificity Naa50 (Nat5)/NatE, an alternative catalytic subunit human NatA, so far remained elusive. In this study, we quantitatively compared Nt-acetylomes wild-type yeast S. cerevisiae expressing endogenous (yNaa50), congenic strain lacking yNaa50, and otherwise identical (hNaa50). Six canonical NatA substrates were Nt-acetylated less yNaa50 than yeast. contrast, ectopically expressed hNaa50 resulted, predominantly, Nt-acetylation Met (iMet) starting N-termini, including iMet-Lys, iMet-Val, iMet-Ala, iMet-Tyr, iMet-Phe, iMet-Leu, iMet-Ser, iMet-Thr N-termini. This identified as being similar, its specificity, to previously characterized hNaa60/NatF. addition, identification, yNaa50-lacking hNaa50, iMet followed small residue such Ser, Thr, Ala, Val, revealed kinetic competition between Met-aminopeptidases (MetAPs), implied that cannot be removed MetAPs, deduction supported our vitro data. As such, Naa50-mediated may act retain proteins MetAP susceptible N-termini fraction retained (followed residue) setting would expected depend on relative levels ribosome-associated Naa50/NatA MetAPs.

参考文章(50)
Petra Van Damme, Thomas Arnesen, Bart Ruttens, Kris Gevaert, In-Gel N-Acetylation for the Quantification of the Degree of Protein In Vivo N-Terminal Acetylation Methods of Molecular Biology. ,vol. 981, pp. 115- 126 ,(2013) , 10.1007/978-1-62703-305-3_9
J. R. Mullen, P. S. Kayne, R. P. Moerschell, S. Tsunasawa, M. Gribskov, M. Colavito-Shepanski, M. Grunstein, F. Sherman, R. Sternglanz, Identification and characterization of genes and mutants for an N‐terminal acetyltransferase from yeast. The EMBO Journal. ,vol. 8, pp. 2067- 2075 ,(1989) , 10.1002/J.1460-2075.1989.TB03615.X
Hanske Westreenen, Hans Bloemendal, Ger J. A. M. Strous, Synthesis of Lens Protein in vitro. FEBS Journal. ,vol. 38, pp. 79- 85 ,(1973) , 10.1111/J.1432-1033.1973.TB03036.X
Bogdan Polevoda, Fred Sherman, N-terminal acetyltransferases and sequence requirements for N-terminal acetylation of eukaryotic proteins. Journal of Molecular Biology. ,vol. 325, pp. 595- 622 ,(2003) , 10.1016/S0022-2836(02)01269-X
Angel Pestana, Henry C. Pitot, Acetylation of nascent polypeptide chains on rat liver polyribosomes in vivo and in vitro Biochemistry. ,vol. 14, pp. 1404- 1412 ,(1975) , 10.1021/BI00678A010
An Staes, Petra Van Damme, Kenny Helsens, Hans Demol, Joël Vandekerckhove, Kris Gevaert, Improved recovery of proteome-informative, protein N-terminal peptides by combined fractional diagonal chromatography (COFRADIC). Proteomics. ,vol. 8, pp. 1362- 1370 ,(2008) , 10.1002/PMIC.200700950