Co-Immunoprecipitation of Long Noncoding RNAs

作者: Victoria A. Moran , Courtney N. Niland , Ahmad M. Khalil

DOI: 10.1007/978-1-62703-011-3_15

关键词:

摘要: … In this chapter, we discuss RIP-Seq, a method that is utilized to discover the lncRNA partners of … Set aside a 100 μL aliquot of lysate to be used as an Input sample. Divide the rest of the …

参考文章(38)
Frank Sleutels, Ronald Zwart, Denise P. Barlow, The non-coding Air RNA is required for silencing autosomal imprinted genes Nature. ,vol. 415, pp. 810- 813 ,(2002) , 10.1038/415810A
Takashi Nagano, Peter Fraser, No-nonsense functions for long noncoding RNAs. Cell. ,vol. 145, pp. 178- 181 ,(2011) , 10.1016/J.CELL.2011.03.014
P. P. Amaral, M. E. Dinger, T. R. Mercer, J. S. Mattick, The eukaryotic genome as an RNA machine Science. ,vol. 319, pp. 1787- 1789 ,(2008) , 10.1126/SCIENCE.1155472
J. Zhao, B. K. Sun, J. A. Erwin, J.-J. Song, J. T. Lee, Polycomb Proteins Targeted by a Short Repeat RNA to the Mouse X Chromosome Science. ,vol. 322, pp. 750- 756 ,(2008) , 10.1126/SCIENCE.1163045
A. M. Khalil, F. Z. Boyar, D. J. Driscoll, Dynamic histone modifications mark sex chromosome inactivation and reactivation during mammalian spermatogenesis Proceedings of the National Academy of Sciences of the United States of America. ,vol. 101, pp. 16583- 16587 ,(2004) , 10.1073/PNAS.0406325101
Mitchell Guttman, Ido Amit, Manuel Garber, Courtney French, Michael F. Lin, David Feldser, Maite Huarte, Or Zuk, Bryce W. Carey, John P. Cassady, Moran N. Cabili, Rudolf Jaenisch, Tarjei S. Mikkelsen, Tyler Jacks, Nir Hacohen, Bradley E. Bernstein, Manolis Kellis, Aviv Regev, John L. Rinn, Eric S. Lander, Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals Nature. ,vol. 458, pp. 223- 227 ,(2009) , 10.1038/NATURE07672
T. Nagano, J. A. Mitchell, L. A. Sanz, F. M. Pauler, A. C. Ferguson-Smith, R. Feil, P. Fraser, The Air Noncoding RNA Epigenetically Silences Transcription by Targeting G9a to Chromatin Science. ,vol. 322, pp. 1717- 1720 ,(2008) , 10.1126/SCIENCE.1163802
V.H. Meller, P.R. Gordadze, Y. Park, X. Chu, C. Stuckenholz, R.L. Kelley, M.I. Kuroda, Ordered assembly of roX RNAs into MSL complexes on the dosage-compensated X chromosome in Drosophila Current Biology. ,vol. 10, pp. 136- 143 ,(2000) , 10.1016/S0960-9822(00)00311-0
Michael B. Clark, John S. Mattick, Long noncoding RNAs in cell biology Seminars in Cell & Developmental Biology. ,vol. 22, pp. 366- 376 ,(2011) , 10.1016/J.SEMCDB.2011.01.001
Rainer B Lanz, Neil J McKenna, Sergio A Onate, Urs Albrecht, Jiemin Wong, Sophia Y Tsai, Ming-Jer Tsai, Bert W O’Malley, A steroid receptor coactivator, SRA, functions as an RNA and is present in an SRC-1 complex. Cell. ,vol. 97, pp. 17- 27 ,(1999) , 10.1016/S0092-8674(00)80711-4