Editorial: the power of a modular approach to transcriptional analysis.

Laurent Chiche, Noémie Jourde-Chiche, Elizabeth Whalen, Scott Presnell, Vivian Gersuk, Kristen Dang, Esperanza Anguiano, Charlie Quinn, Stéphane Burtey, Yvon Berland, Gilles Kaplanski, Jean-Robert Harle, Virginia Pascual, Damien Chaussabel, Modular Transcriptional Repertoire Analyses of Adults With Systemic Lupus Erythematosus Reveal Distinct Type I and Type II Interferon Signatures Arthritis & Rheumatism. ,vol. 66, pp. 1583- 1595 ,(2014) , 10.1002/ART.38628

Shuzhao Li, Nadine Rouphael, Sai Duraisingham, Sandra Romero-Steiner, Scott Presnell, Carl Davis, Daniel S Schmidt, Scott E Johnson, Andrea Milton, Gowrisankar Rajam, Sudhir Kasturi, George M Carlone, Charlie Quinn, Damien Chaussabel, A Karolina Palucka, Mark J Mulligan, Rafi Ahmed, David S Stephens, Helder I Nakaya, Bali Pulendran, None, Molecular signatures of antibody responses derived from a systems biology study of five human vaccines Nature Immunology. ,vol. 15, pp. 195- 204 ,(2014) , 10.1038/NI.2789

Mary K. Crow, Kyriakos A. Kirou, Jay Wohlgemuth, Microarray analysis of interferon-regulated genes in SLE. Autoimmunity. ,vol. 36, pp. 481- 490 ,(2003) , 10.1080/08916930310001625952

Pratip K Chattopadhyay, Todd M Gierahn, Mario Roederer, J Christopher Love, Single-cell technologies for monitoring immune systems Nature Immunology. ,vol. 15, pp. 128- 135 ,(2014) , 10.1038/NI.2796

W Nicholas Haining, Strength in numbers: comparing vaccine signatures the modular way Nature Immunology. ,vol. 15, pp. 139- 141 ,(2014) , 10.1038/NI.2807

Gerlinde Obermoser, Scott Presnell, Kelly Domico, Hui Xu, Yuanyuan Wang, Esperanza Anguiano, LuAnn Thompson-Snipes, Rajaram Ranganathan, Brad Zeitner, Anna Bjork, David Anderson, Cate Speake, Emily Ruchaud, Jason Skinner, Laia Alsina, Mamta Sharma, Helene Dutartre, Alma Cepika, Elisabeth Israelsson, Phuong Nguyen, Quynh-Anh Nguyen, A. Carson Harrod, Sandra M. Zurawski, Virginia Pascual, Hideki Ueno, Gerald T. Nepom, Charlie Quinn, Derek Blankenship, Karolina Palucka, Jacques Banchereau, Damien Chaussabel, Systems Scale Interactive Exploration Reveals Quantitative and Qualitative Differences in Response to Influenza and Pneumococcal Vaccines Immunity. ,vol. 38, pp. 831- 844 ,(2013) , 10.1016/J.IMMUNI.2012.12.008

M Petri, S Singh, H Tesfasyone, R Dedrick, K Fry, PG Lal, G Williams, JW Bauer, PK Gregersen, TW Behrens, EC Baechler, Longitudinal expression of type I interferon responsive genes in systemic lupus erythematosus Lupus. ,vol. 18, pp. 980- 989 ,(2009) , 10.1177/0961203309105529

Sunny Malhotra, Marta F. Bustamante, Francisco Pérez-Miralles, Jordi Rio, Mari Carmen Ruiz de Villa, Esteban Vegas, Lara Nonell, Florian Deisenhammer, Nicolás Fissolo, Ramil N. Nurtdinov, Xavier Montalban, Manuel Comabella, Search for Specific Biomarkers of IFNβ Bioactivity in Patients with Multiple Sclerosis PLoS ONE. ,vol. 6, pp. e23634- ,(2011) , 10.1371/JOURNAL.PONE.0023634

P K Gregersen, T W Brehrens, Fine mapping the phenotype in autoimmune disease: the promise and pitfalls of DNA microarray technologies. Genes and Immunity. ,vol. 4, pp. 175- 176 ,(2003) , 10.1038/SJ.GENE.6363976

Chloe I. Bloom, Christine M. Graham, Matthew P. R. Berry, Fotini Rozakeas, Paul S. Redford, Yuanyuan Wang, Zhaohui Xu, Katalin A. Wilkinson, Robert J. Wilkinson, Yvonne Kendrick, Gilles Devouassoux, Tristan Ferry, Makoto Miyara, Diane Bouvry, Valeyre Dominique, Guy Gorochov, Derek Blankenship, Mitra Saadatian, Phillip Vanhems, Huw Beynon, Rama Vancheeswaran, Melissa Wickremasinghe, Damien Chaussabel, Jacques Banchereau, Virginia Pascual, Ling-pei Ho, Marc Lipman, Anne O’Garra, Transcriptional Blood Signatures Distinguish Pulmonary Tuberculosis, Pulmonary Sarcoidosis, Pneumonias and Lung Cancers PLOS ONE. ,vol. 8, ,(2013) , 10.1371/JOURNAL.PONE.0070630