Identification of endangered Alabama lampmussel ( Lampsilis virescens ) specimens collected in the Emory river, Tennessee, USA via DNA barcoding
作者： Gregory R. Moyer , Edgardo Díaz-Ferguson
DOI: 10.1007/S10592-012-0328-Z
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摘要: The federally endangered Alabama lampmussel (Lampsilis virescens) has been presumed extirpated in the Emory river, TN for almost four decades. In fall of 2011, three specimens that were morphologically identified as L. virescens (based on external shell morphology) collected from river. significance such a find led biologists to take noninvasive tissue sample each individual genetic confirmation. Approximately 400 nucleotides mtDNA COI gene sequenced along with two samples Paint Rock DNA sequence data was also obtained Genbank other Lampsilis sp. Maximum parsimony and Bayesian phylogenetic methods revealed strong support clade consisting putative river known (Paint origin) sister all taxa. These results indicated individuals indeed virescens.
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sci-hub.se 参考文章(21)
Arthur E. Bogan, Freshwater Fisheries, James D. Williams, Jeffrey T. Garner, Freshwater Mussels of Alabama and the Mobile Basin in Georgia, Mississippi, and Tennessee ,(2008)
Paul W. Parmalee, Arthur E. Bogan, Tennessee's Rare Wildlife - Volume II: the Mollusks ,(1983)
A.E. Bogan, S.A. Ahlstedt, P.D. Hartfield, R.J. Neves, J.D. Williams, Status of aquatic mollusks in the southeastern United States: a downward spiral of diversity ,(1997)
T A Hall, BIOEDIT: A USER-FRIENDLY BIOLOGICAL SEQUENCE ALIGNMENT EDITOR AND ANALYSIS PROGRAM FOR WINDOWS 95/98/ NT Nucleic Acids Symposium Series. ,vol. 41, pp. 95- 98 ,(1999) , 10.14601/PHYTOPATHOL_MEDITERR-14998U1.29
Purification of nucleic acids Wiley‐VCH Verlag GmbH & Co. KGaA. pp. 118- 134 ,(2011) , 10.1002/3527600744.CH6
Mehrdad Hajibabaei, Gregory AC Singer, Elizabeth L Clare, Paul DN Hebert, Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring BMC Biology. ,vol. 5, pp. 24- 24 ,(2007) , 10.1186/1741-7007-5-24
B. Larget, D. L. Simon, Markov Chasin Monte Carlo Algorithms for the Bayesian Analysis of Phylogenetic Trees Molecular Biology and Evolution. ,vol. 16, pp. 750- 750 ,(1999) , 10.1093/OXFORDJOURNALS.MOLBEV.A026160
James D. Williams, Melvin L. Warren, Kevin S. Cummings, John L. Harris, Richard J. Neves, Conservation Status of Freshwater Mussels of the United States and Canada Fisheries. ,vol. 18, pp. 6- 22 ,(1993) , 10.1577/1548-8446(1993)018<0006:CSOFMO>2.0.CO;2
Nicholas Metropolis, Arianna W. Rosenbluth, Marshall N. Rosenbluth, Augusta H. Teller, Edward Teller, Equation of State Calculations by Fast Computing Machines The Journal of Chemical Physics. ,vol. 21, pp. 1087- 1092 ,(1953) , 10.1063/1.1699114
D. Posada, K. A. Crandall, MODELTEST: testing the model of DNA substitution. Bioinformatics. ,vol. 14, pp. 817- 818 ,(1998) , 10.1093/BIOINFORMATICS/14.9.817