Normalization and systematic measurement error in cDNA microarray data

David B Finkelstein , Jeremy Gollub , J Michael Cherry
Joint Statistical Meeting 2000. Unpublished manuscript

13
2002
CZ CELLxGENE Discover: A single-cell data platform for scalable exploration, analysis and modeling of aggregated data

CZI Single-Cell Biology , Shibla Abdulla , Brian Aevermann , Pedro Assis
bioRxiv 2023.10. 30.563174 -2023.10. 30.563174

12
2023
Data navigation on the ENCODE portal

Meenakshi S Kagda , Bonita Lam , Casey Litton , Corinn Small
arXiv preprint arXiv:2305.00006

7
2023
An integrated RFLP map of Arabidopsis thaliana

Howard M Goodman , Susan Hanley , Sam Cartinhour , J Michael Cherry
DNA-based markers in plants 159 -162

3
1994
Integrative chromatin state annotation of 234 human ENCODE4 cell types using Segway reveals disease drivers

Marjan Farahbod , Abdul Rahman Diab , Paul Sud , Meenakshi Kagda
bioRxiv 2023.10. 26.564254 -2023.10. 26.564254

1
2023
Semantic Research Platform for Model Organism Data

Maxime Déraspe , Kalpana Karra , Gail Binkley , Julie Sullivan
Biomedical Data Integration and Discovery

1
2016
Updates to the Alliance of Genome Resources central infrastructure

Suzanne A Aleksander , Anna V Anagnostopoulos , Giulia Antonazzo , Valerio Arnaboldi
Genetics 227 ( 1) iyae049 -iyae049

1
2024
eP349: Describing the Impact of Genomic Variation on Function (IGVF) Consortium submitted on behalf of the IGVF Consortium members

Lucinda Fulton , Ting Wang , Feng Yue , Benjamin Hitz
Genetics in Medicine 24 ( 3) S219 -S219

2022
Genomic Resource for the Yeast Saccharomyces

Stacia R Engel , Marek S Skrzypek , Sage T Hellerstedt , J Michael Cherry
Sage

2017
Genomic Database for the Yeast Saccharomyces

Sage T Hellerstedt , Robert S Nash , Shuai Weng , J Michael Cherry
Sage

2017
Integrating genome-wide datasets into Saccharomyces Genome Database

Edith D Wong , Janos Demeter , Robert S Nash , Sage Hellerstedt
YEAST 32 S258 -S258

2015
Homology curation at SGD: Yeast and yeast research inform genetic medicine

Stacia R Engel , Maria C Costanzo , Robert S Nash , Edith D Wong
YEAST 32 S177 -S177

2015
Saccharomyces Genome Database workshop, getting more out of SGD

Rama Balakrishnan , Maria C Costanzo , Stacia R Engel , Edith D Wong
YEAST 32 S84 -S84

2015
Innovative visualization tools to interconnect multiple data types at SGD

Rama Balakrishnan , Kelley Paskov , Travis Sheppard , J Michael Cherry
YEAST 32 S246 -S246

2015
New regulation data in the Saccharomyces Genome Database

Maria C Costanzo , Stacia R Engel , Gail Binkley , Esther T Chan
YEAST 30 74 -74

2013
Genome Maps 9. Arabidopsis thaliana

Seung Yon Rhee , Shuai Weng , David Flanders , J Michael Cherry
Science 282 ( 5389) 671 -678

1998
SPECIAL SECTION GENOME Arabidopsis thaliana: A Model Plant for Genome Analysis

David W Meinke , J Michael Cherry , Caroline Dean , Steven D Rounsley

Brief history of yeast genomics

Stacia R Engel , J Michael Cherry

Journal: Principles of metadata organization at the ENCODE data coordination center

Eurie L Hong , Cricket A Sloan , Esther T Chan , Jean M Davidson