Induction of Viable but Nonculturable State in Rhodococcus and Transcriptome Analysis Using RNA-seq

作者: Xiaomei Su , Li Guo , Linxian Ding , Kun Qu , Chaofeng Shen

DOI: 10.1371/JOURNAL.PONE.0147593

关键词: MicrobiologyGeneGene expressionBacteriaBiologyRNA polymeraseRhodococcusViable but nonculturableNADH dehydrogenaseTranscriptomeGeneral Biochemistry, Genetics and Molecular BiologyGeneral Agricultural and Biological SciencesGeneral Medicine

摘要: … control strategies for prevention and resuscitation of bacteria from the VBNC state, for the … than the initial ATP level in the normal cells [46]. ATP accumulation in the VBNC cells might …

参考文章(46)
Slava S. Epstein, General Model of Microbial Uncultivability Springer, Berlin, Heidelberg. pp. 131- 159 ,(2009) , 10.1007/978-3-540-85465-4_2
Arseny S. Kaprelyants, Douglas B. Kell, Dormancy in Stationary-Phase Cultures of Micrococcus luteus: Flow Cytometric Analysis of Starvation and Resuscitation. Applied and Environmental Microbiology. ,vol. 59, pp. 3187- 3196 ,(1993) , 10.1128/AEM.59.10.3187-3196.1993
Michael J. Larkin, Leonid A. Kulakov, Christopher C.R. Allen, Biodegradation by members of the genus Rhodococcus: biochemistry, physiology, and genetic adaptation. Advances in Applied Microbiology. ,vol. 59, pp. 1- 29 ,(2006) , 10.1016/S0065-2164(06)59001-X
Xiao‐Mei Su, Yin‐Dong Liu, Muhammad Zaffar Hashmi, Lin‐Xian Ding, Chao‐Feng Shen, Culture‐dependent and culture‐independent characterization of potentially functional biphenyl‐degrading bacterial community in response to extracellular organic matter from Micrococcus luteus Microbial Biotechnology. ,vol. 8, pp. 569- 578 ,(2015) , 10.1111/1751-7915.12266
Mitsutoshi Senoh, Jayeeta Ghosh-Banerjee, Thandavarayan Ramamurthy, Takashi Hamabata, Takashi Kurakawa, Makoto Takeda, Rita R. Colwell, G. Balakrish Nair, Yoshifumi Takeda, Conversion of viable but nonculturable Vibrio cholerae to the culturable state by co-culture with eukaryotic cells Microbiology and Immunology. ,vol. 54, pp. 502- 507 ,(2010) , 10.1111/J.1348-0421.2010.00245.X
Thomas Nyström, Conditional senescence in bacteria: death of the immortals Molecular Microbiology. ,vol. 48, pp. 17- 23 ,(2003) , 10.1046/J.1365-2958.2003.03385.X
James D. Oliver, The Viable but Nonculturable State in Bacteria Journal of Microbiology. ,vol. 43, pp. 93- 100 ,(2005)
Daniel Yekutieli, Yoav Benjamini, THE CONTROL OF THE FALSE DISCOVERY RATE IN MULTIPLE TESTING UNDER DEPENDENCY Annals of Statistics. ,vol. 29, pp. 1165- 1188 ,(2001) , 10.1214/AOS/1013699998
D. Pinto, V. Almeida, M. Almeida Santos, L. Chambel, Resuscitation of Escherichia coli VBNC cells depends on a variety of environmental or chemical stimuli Journal of Applied Microbiology. ,vol. 110, pp. 1601- 1611 ,(2011) , 10.1111/J.1365-2672.2011.05016.X
Virginie Serpaggi, Fabienne Remize, Ghislaine Recorbet, Eliane Gaudot-Dumas, Anabelle Sequeira-Le Grand, Hervé Alexandre, Characterization of the “viable but nonculturable” (VBNC) state in the wine spoilage yeast Brettanomyces Food Microbiology. ,vol. 30, pp. 438- 447 ,(2012) , 10.1016/J.FM.2011.12.020