Architectural proteins, transcription, and the three-dimensional organization of the genome
作者： Caelin Cubeñas-Potts , Victor G. Corces
DOI: 10.1016/J.FEBSLET.2015.05.025
关键词: ChIP-sequencing 、 Genetics 、 Scaffold/matrix attachment region 、 Chromatin 、 Chromosome conformation capture 、 Chromatin Fiber 、 ChIP-on-chip 、 Chromatin remodeling 、 ChIA-PET 、 Biology 、 Computational biology
摘要: … Architectural proteins, also known as insulator proteins, appear to play a … architectural proteins in Drosophila and mammals, and describe evidence suggesting that architectural proteins …
core.ac.uk
sci-hub.se 参考文章(88)
Darío G. Lupiáñez, Katerina Kraft, Verena Heinrich, Peter Krawitz, Francesco Brancati, Eva Klopocki, Denise Horn, Hülya Kayserili, John M. Opitz, Renata Laxova, Fernando Santos-Simarro, Brigitte Gilbert-Dussardier, Lars Wittler, Marina Borschiwer, Stefan A. Haas, Marco Osterwalder, Martin Franke, Bernd Timmermann, Jochen Hecht, Malte Spielmann, Axel Visel, Stefan Mundlos, Disruptions of Topological Chromatin Domains Cause Pathogenic Rewiring of Gene-Enhancer Interactions Cell. ,vol. 161, pp. 1012- 1025 ,(2015) , 10.1016/J.CELL.2015.04.004
Antonio Tedeschi, Gordana Wutz, Sébastien Huet, Markus Jaritz, Annelie Wuensche, Erika Schirghuber, Iain Finley Davidson, Wen Tang, David A. Cisneros, Venugopal Bhaskara, Tomoko Nishiyama, Alipasha Vaziri, Anton Wutz, Jan Ellenberg, Jan-Michael Peters, Wapl is an essential regulator of chromatin structure and chromosome segregation. Nature. ,vol. 501, pp. 564- 568 ,(2013) , 10.1038/NATURE12471
Wulan Deng, Jongjoo Lee, Hongxin Wang, Jeff Miller, Andreas Reik, Philip D. Gregory, Ann Dean, Gerd A. Blobel, Controlling long-range genomic interactions at a native locus by targeted tethering of a looping factor. Cell. ,vol. 149, pp. 1233- 1244 ,(2012) , 10.1016/J.CELL.2012.03.051
Edward Ramos, Dolanchanpa Ghosh, Ellen Baxter, Victor G. Corces, Genomic Organization of gypsy Chromatin Insulators in Drosophila melanogaster Genetics. ,vol. 172, pp. 2337- 2349 ,(2006) , 10.1534/GENETICS.105.054742
M. Gaszner, J. Vazquez, P. Schedl, The Zw5 protein, a component of the scs chromatin domain boundary, is able to block enhancer–promoter interaction Genes & Development. ,vol. 13, pp. 2098- 2107 ,(1999) , 10.1101/GAD.13.16.2098
Suhas SP Rao, Miriam H Huntley, Neva C Durand, Elena K Stamenova, Ivan D Bochkov, James T Robinson, Adrian L Sanborn, Ido Machol, Arina D Omer, Eric S Lander, Erez Lieberman Aiden, None, A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping Cell. ,vol. 159, pp. 1665- 1680 ,(2014) , 10.1016/J.CELL.2014.11.021
Hua-Bing Li, Katsuhito Ohno, Hongxing Gui, Vincenzo Pirrotta, Insulators Target Active Genes to Transcription Factories and Polycomb-Repressed Genes to Polycomb Bodies PLoS Genetics. ,vol. 9, pp. e1003436- ,(2013) , 10.1371/JOURNAL.PGEN.1003436
Varun Narendra, Pedro P. Rocha, Disi An, Ramya Raviram, Jane A. Skok, Esteban O. Mazzoni, Danny Reinberg, CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation Science. ,vol. 347, pp. 1017- 1021 ,(2015) , 10.1126/SCIENCE.1262088
Amartya Sanyal, Bryan R. Lajoie, Gaurav Jain, Job Dekker, The long-range interaction landscape of gene promoters Nature. ,vol. 489, pp. 109- 113 ,(2012) , 10.1038/NATURE11279
Suzana Hadjur, Luke M. Williams, Natalie K. Ryan, Bradley S. Cobb, Tom Sexton, Peter Fraser, Amanda G. Fisher, Matthias Merkenschlager, Cohesins form chromosomal cis-interactions at the developmentally regulated IFNG locus Nature. ,vol. 460, pp. 410- 413 ,(2009) , 10.1038/NATURE08079