A new method for species identification and differentiation of Mycobacterium chelonae complex based on amplified hsp65 restriction analysis (AHSPRA)

作者: Suresh B. Selvaraju , Izhar U.H. Khan , Jagjit S. Yadav

DOI: 10.1016/J.MCP.2004.09.007

关键词: Restriction digestPolymerase chain reactionMycobacterium abscessusMycobacterium immunogenumSpecies identificationBiologyMetalworking fluidMicrobiologyMycobacterium chelonaeGene

摘要: Members of the Mycobacterium chelonae complex (MCC), namely M. chelonae, abscessus and immunogenum, have been implicated in nosocomial infections occupational respiratory illnesses like hypersensitivity pneumonitis (HP) associated with contaminated metalworking fluid (MWF) exposures. Close relationship among these member species makes their differentiation cumbersome using existing methods. Here we report a simple rapid method for unambiguous identification three-member MCC group PCR-restriction analysis targeting 667-bp segment variable region 65-kDa-heat shock protein (hsp65) gene. This assay, described as Amplified hsp65 Restriction Analysis (AHSPRA), can discriminate all three individual one-step restriction digestion either BbvI or Eco0109I. The enzyme NarI differentiate immunogenum from other two (M. abscessus). developed was validated several non-MCC reference rapidly growing mycobacteria (RGM) field isolates MWF samples. Direct cell-lysis used instead conventional DNA template preparation, which improved rapidity, simplicity adaptability method. results suggest that unambiguously RGM one another.

参考文章(20)
H. Ringuet, C. Akoua-Koffi, S. Honore, A. Varnerot, V. Vincent, P. Berche, J. L. Gaillard, C. Pierre-Audigier, hsp65 Sequencing for Identification of Rapidly Growing Mycobacteria Journal of Clinical Microbiology. ,vol. 37, pp. 852- 857 ,(1999) , 10.1128/JCM.37.3.852-857.1999
V A Silcox, R C Good, M M Floyd, Identification of clinically significant Mycobacterium fortuitum complex isolates. Journal of Clinical Microbiology. ,vol. 14, pp. 686- 691 ,(1981) , 10.1128/JCM.14.6.686-691.1981
A Telenti, F Marchesi, M Balz, F Bally, E C Böttger, T Bodmer, Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis. Journal of Clinical Microbiology. ,vol. 31, pp. 175- 178 ,(1993) , 10.1128/JCM.31.2.175-178.1993
S. C. Smole, F. McAleese, J. Ngampasutadol, C. F. von Reyn, R. D. Arbeit, Clinical and Epidemiological Correlates of Genotypes within the Mycobacterium avium Complex Defined by Restriction and Sequence Analysis of hsp65 Journal of Clinical Microbiology. ,vol. 40, pp. 3374- 3380 ,(2002) , 10.1128/JCM.40.9.3374-3380.2002
Jagjit S. Yadav, Izhar U. H. Khan, Farnaz Fakhari, Mathew B. Soellner, DNA-Based Methodologies for Rapid Detection, Quantification, and Species- or Strain-Level Identification of Respiratory Pathogens (Mycobacteria and Pseudomonads) in Metalworking Fluids Applied Occupational and Environmental Hygiene. ,vol. 18, pp. 966- 975 ,(2003) , 10.1080/10473220390237700
J. Steven Moore, Margaret Christensen, Rebecca W. Wilson, Richard J. Wallace, Yansheng Zhang, Donald R. Nash, Brian Shelton, Mycobacterial contamination of metalworking fluids: involvement of a possible new taxon of rapidly growing mycobacteria. American Industrial Hygiene Association Journal. ,vol. 61, pp. 205- 213 ,(2000) , 10.1080/15298660008984529
Victoria J. Fraser, Marilyn Jones, Patrick R. Murray, Gerald Medoff, Yansheng Zhang, Richard J. Wallace, Contamination of Flexible Fiberoptic Bronchoscopes withMycobacterium chelonaeLinked to an Automated Bronchoscope Disinfection Machine American Review of Respiratory Disease. ,vol. 145, pp. 853- 855 ,(1992) , 10.1164/AJRCCM/145.4_PT_1.853