Ligand-Based Pharmacophore Screening Strategy: a Pragmatic Approach for Targeting HER Proteins.

作者: Nivya James , K. Ramanathan

DOI: 10.1007/S12010-018-2724-4

关键词:

摘要: Targeting ErbB family of receptors is an important therapeutic option, because its essential role in the broad spectrum human cancers, including non-small cell lung cancer (NSCLC). Therefore, present work, considerable effort has been made to develop inhibitor against HER proteins, by combining use pharmacophore modelling, docking scoring functions, and ADME property analysis. Initially, a five-point model was developed using known inhibitors. The generated then used as query screen total 468,880 compounds three databases namely ZINC, ASINEX, DrugBank. Subsequently, analysis carried out obtain hit molecules that could inhibit receptors. Further, GLIDE scores properties resulted one BAS01025917 with higher glide scores, increased CNS involvement, good pharmaceutically relevant than reference ligand, afatinib. Furthermore, inhibitory activity lead validated performing molecular dynamic simulations. Of note, found possess scaffolds antitumor activity. We believe this novel molecule can be further exploited for development pan-HER low toxicity greater potential.

参考文章(94)
Alan Sena Pinheiro, Jaqueline Bianca Carvalho Duarte, Cláudio Nahum Alves, Fábio Alberto de Molfetta, Virtual Screening and Molecular Dynamics Simulations from a Bank of Molecules of the Amazon Region Against Functional NS3-4A Protease-Helicase Enzyme of Hepatitis C Virus. Applied Biochemistry and Biotechnology. ,vol. 176, pp. 1709- 1721 ,(2015) , 10.1007/S12010-015-1672-5
Nutan Chauhan, Ambarish Sharan Vidyarthi, Raju Poddar, None, Comparative Analysis of Different DNA-Binding Drugs for Leishmaniasis Cure: A Pharmacoinformatics Approach Chemical Biology & Drug Design. ,vol. 80, pp. 54- 63 ,(2012) , 10.1111/J.1747-0285.2012.01329.X
Silvano Bosari, Fiamma Buttitta, Guido Coggi, Barbara Cassani, Massimo Roncalli, Monica Falleni, Monica Miozzo, Caterina Pellegrini, Antonio Marchetti, HER-2/Neu alterations in non-small cell lung cancer: a comprehensive evaluation by real time reverse transcription-PCR, fluorescence in situ hybridization, and immunohistochemistry. Clinical Cancer Research. ,vol. 9, pp. 3645- 3652 ,(2003)
Helena A. Yu, Gregory J. Riely, Second-generation epidermal growth factor receptor tyrosine kinase inhibitors in lung cancers. Journal of The National Comprehensive Cancer Network. ,vol. 11, pp. 161- 169 ,(2013) , 10.6004/JNCCN.2013.0024
Mahesh Kumar Teli, G. K. Rajanikant, Pharmacophore generation and atom-based 3D-QSAR of novel quinoline-3-carbonitrile derivatives as Tpl2 kinase inhibitors Journal of Enzyme Inhibition and Medicinal Chemistry. ,vol. 27, pp. 558- 570 ,(2012) , 10.3109/14756366.2011.603128
Anastassios V Koutsopoulos, Dimitris Mavroudis, Konstantina I Dambaki, John Souglakos, Eleni G Tzortzaki, John Drositis, George S Delides, Vassilis Georgoulias, Efstathios N Stathopoulos, None, Simultaneous expression of c-erbB-1, c-erbB-2, c-erbB-3 and c-erbB-4 receptors in non-small-cell lung carcinomas: Correlation with clinical outcome Lung Cancer. ,vol. 57, pp. 193- 200 ,(2007) , 10.1016/J.LUNGCAN.2007.03.009
Santiago Vilar, Mayukh Chakrabarti, Stefano Costanzi, Prediction of passive blood–brain partitioning: Straightforward and effective classification models based on in silico derived physicochemical descriptors Journal of Molecular Graphics and Modelling. ,vol. 28, pp. 899- 903 ,(2010) , 10.1016/J.JMGM.2010.03.010
Ami Citri, Kochupurakkal Bose Skaria, Yosef Yarden, The deaf and the dumb: the biology of ErbB-2 and ErbB-3 Experimental Cell Research. ,vol. 284, pp. 54- 65 ,(2003) , 10.1016/S0014-4827(02)00101-5
Hiruy S. Meharena, Philip Chang, Malik M. Keshwani, Krishnadev Oruganty, Aishwarya K. Nene, Natarajan Kannan, Susan S. Taylor, Alexandr P. Kornev, Deciphering the Structural Basis of Eukaryotic Protein Kinase Regulation PLoS Biology. ,vol. 11, pp. e1001680- ,(2013) , 10.1371/JOURNAL.PBIO.1001680