A Prototypic Lysine Methyltransferase 4 from Archaea with Degenerate Sequence Specificity Methylates Chromatin Proteins Sul7d and Cren7 in Different Patterns

作者: Yanling Niu , Yisui Xia , Sishuo Wang , Jiani Li , Caoyuan Niu

DOI: 10.1074/JBC.M113.452979

关键词:

摘要: Histone methylation is one of the major epigenetic modifications even in early diverging unicellular eukaryotes. We show that a widespread lysine methyltransferase from Archaea (aKMT4), bears striking structural and functional resemblance to core distantly related eukaryotic KMT4/Dot1. aKMT4 methylates set various proteins, including chromatin proteins Sul7d Cren7, RNA exosome components. Csl4- Rrp4-exosome complexes are methylated different patterns. can self-methylate intramolecularly compete with other for methyl group. Automethylation inhibited by suitable substrates or DNA concentration-dependent manner. The automethylated enzyme shows relatively compromised activity. aKMT4-8A mutant abrogated automethylation more than 150% increase substrates, suggesting possible mechanism regulate More interestingly, Sul7d, but not significantly enhanced DNA. MS/MS kinetic analysis further suggest context. These data provide clue regulation activity local environment, albeit as promiscuous required extensive variegated Sulfolobus. This study supports prokaryotic origin model histone modification enzymes sheds light on archaeal chromatin.

参考文章(54)
L. Aravind, Saraswathi Abhiman, Lakshminarayan M. Iyer, Natural history of the eukaryotic chromatin protein methylation system. Progress in Molecular Biology and Translational Science. ,vol. 101, pp. 105- 176 ,(2011) , 10.1016/B978-0-12-387685-0.00004-4
Abu Nasar Siddique, Renata Z. Jurkowska, Tomasz P. Jurkowski, Albert Jeltsch, Auto-methylation of the mouse DNA-(cytosine C5)-methyltransferase Dnmt3a at its active site cysteine residue. FEBS Journal. ,vol. 278, pp. 2055- 2063 ,(2011) , 10.1111/J.1742-4658.2011.08121.X
M. L. Reno, N. L. Held, C. J. Fields, P. V. Burke, R. J. Whitaker, Biogeography of the Sulfolobus islandicus pan-genome Proceedings of the National Academy of Sciences of the United States of America. ,vol. 106, pp. 8605- 8610 ,(2009) , 10.1073/PNAS.0808945106
Floor Frederiks, Manuel Tzouros, Gideon Oudgenoeg, Tibor van Welsem, Maarten Fornerod, Jeroen Krijgsveld, Fred van Leeuwen, Nonprocessive methylation by Dot1 leads to functional redundancy of histone H3K79 methylation states Nature Structural & Molecular Biology. ,vol. 15, pp. 550- 557 ,(2008) , 10.1038/NSMB.1432
L. Guo, K. Brugger, C. Liu, S. A. Shah, H. Zheng, Y. Zhu, S. Wang, R. K. Lillestol, L. Chen, J. Frank, D. Prangishvili, L. Paulin, Q. She, L. Huang, R. A. Garrett, Genome Analyses of Icelandic Strains of Sulfolobus islandicus, Model Organisms for Genetic and Virus-Host Interaction Studies Journal of Bacteriology. ,vol. 193, pp. 1672- 1680 ,(2011) , 10.1128/JB.01487-10
Kathleen Sandman, John N Reeve, Archaeal histones and the origin of the histone fold. Current Opinion in Microbiology. ,vol. 9, pp. 520- 525 ,(2006) , 10.1016/J.MIB.2006.08.003
Qin Feng, Hengbin Wang, Huck Hui Ng, Hediye Erdjument-Bromage, Paul Tempst, Kevin Struhl, Yi Zhang, Methylation of H3-Lysine 79 Is Mediated by a New Family of HMTases without a SET Domain Current Biology. ,vol. 12, pp. 1052- 1058 ,(2002) , 10.1016/S0960-9822(02)00901-6
Cyrus Martin, Yi Zhang, The diverse functions of histone lysine methylation. Nature Reviews Molecular Cell Biology. ,vol. 6, pp. 838- 849 ,(2005) , 10.1038/NRM1761