Mutation-based detection and monitoring of cell-free tumor DNA in peripheral blood of cancer patients

作者: L. Lipska , M. Levy , V. Visokai , M. Zavoral , M. Minarik

DOI: 10.1016/J.AB.2012.06.018

关键词:

摘要: Prognosis of solid cancers is generally more favorable if the disease treated early and efficiently. A key to long cancer survival in radical surgical therapy directed at primary tumor followed by detection possible progression, with swift application subsequent therapeutic intervention reducing risk generalization. The conventional follow-up care based on regular observation markers combination computed tomography/endoscopic ultrasound/magnetic resonance/positron emission tomography imaging monitor potential progression. recent development methodologies allowing screening for a presence cell-free DNA (cfDNA) brings new viable tool management major cancers. It believed that cfDNA released from tumors primarily due necrotization, whereas origin nontumorous mostly apoptotic. process starts proper collection treatment blood isolation storage plasma. next important steps include extraction plasma its and/or quantification. To distinguish cfDNA, specific somatic mutations, previously localized tissue, are identified extracted cfDNA. Apart mutation approaches, several dedicated techniques have been presented detect low levels an excess (nonmutated) DNA, including real-time polymerase chain reaction (PCR), "BEAMing" (beads, emulsion, amplification, magnetics), denaturing capillary electrophoresis. Techniques facilitate mutant detection, such as mutant-enriched PCR COLD-PCR (coamplification lower denaturation temperature PCR), also applicable. Finally, number newly developed miniaturized single-molecule sequencing, promising future.

参考文章(96)
Bret Taback, Dave S B Hoon, Circulating nucleic acids in plasma and serum: past, present and future. Current Opinion in Molecular Therapeutics. ,vol. 6, pp. 273- 278 ,(2004)
M J Brisco, A A Morley, P J Sykes, E Hughes, J Condon, S H Neoh, Quantitation of targets for PCR by use of limiting dilution. BioTechniques. ,vol. 13, pp. 444- 449 ,(1992)
Gabriela Veprekova, Miroslav Zavoral, Petra Minarikova, Barbora Belsanova, Lucie Benesova, Marek Minarik, Miroslav Levy, Ludmila Lipska, Utility of cell-free tumour DNA for post-surgical follow-up of colorectal cancer patients. Anticancer Research. ,vol. 32, pp. 1621- 1626 ,(2012)
S A Leon, B Shapiro, M J Yaros, D M Sklaroff, Free DNA in the Serum of Cancer Patients and the Effect of Therapy Cancer Research. ,vol. 37, pp. 646- 650 ,(1977)
Ivy HN Wong, YM Dennis Lo, Jun Zhang, Choong-Tsek Liew, Margaret HL Ng, Nathalie Wong, Paul BS Lai, Wan Y Lau, N Magnus Hjelm, Philip J Johnson, None, Detection of Aberrant p16 Methylation in the Plasma and Serum of Liver Cancer Patients Cancer Research. ,vol. 59, pp. 71- 73 ,(1999)
Ugur Deligezer, Fulya Yaman, Nilgün Erten, Nejat Dalay, Frequent copresence of methylated DNA and fragmented nucleosomal DNA in plasma of lymphoma patients Clinica Chimica Acta. ,vol. 335, pp. 89- 94 ,(2003) , 10.1016/S0009-8981(03)00279-1
H. Christina Fan, Yair J. Blumenfeld, Yasser Y. El-Sayed, Jane Chueh, Stephen R. Quake, Microfluidic digital PCR enables rapid prenatal diagnosis of fetal aneuploidy American Journal of Obstetrics and Gynecology. ,vol. 200, pp. 543.e1- 543.e7 ,(2009) , 10.1016/J.AJOG.2009.03.002
Jin-Jung Choi, Charles F. Reich, David S. Pisetsky, The role of macrophages in the in vitro generation of extracellular DNA from apoptotic and necrotic cells. Immunology. ,vol. 115, pp. 55- 62 ,(2005) , 10.1111/J.1365-2567.2005.02130.X
Jian-Feng Wang, Metastatic suppressor genes inactivated by aberrant methylation in gastric cancer World Journal of Gastroenterology. ,vol. 13, pp. 5692- 5698 ,(2007) , 10.3748/WJG.V13.I43.5692
E. A. Ottesen, J. W. Hong, S. R. Quake, J. R. Leadbetter, Microfluidic Digital PCR Enables Multigene Analysis of Individual Environmental Bacteria Science. ,vol. 314, pp. 1464- 1467 ,(2006) , 10.1126/SCIENCE.1131370