Molecular dynamics simulation studies of transmembrane transport of chemical components in Chinese herbs and the function of platycodin D in a biological membrane

作者: Shufang Yang , Haiou Ding , Ran Wang , Xingxing Dai , Xinyuan Shi

DOI: 10.1016/J.JTCMS.2017.09.003

关键词:

摘要: Abstract Objective To study the transmembrane transport of chemical components Chinese herbs and to explore function platycodin D (PD) on biomembranes. Methods Interaction between PD dipalmitoylphosphatidylcholine (DPPC) bilayer was reproduced by molecular dynamics simulation with Martini force field. A model validation methodological were first performed, based investigations for three herbal compounds distinct hydrophilic properties. Results increased mobility DPPC since its aglycone strongly interacted hydrophobic layer, which broke structure gate weakened ordered performance tails. Conclusion The field successfully applied interaction a biological membrane. By combining equilibrium morphology, distribution drugs inside outside biomembrane, sites bilayer, factors influencing elucidated in membrane reproduced.

参考文章(31)
C. Carbone, R. Pignatello, 6 – DSC in drug–biomembrane interaction studies Drug–Biomembrane Interaction Studies#R##N#The Application of Calorimetric Techniques. pp. 213- 236 ,(2013) , 10.1533/9781908818348.213
Tamotsu Nikaido, Tsuyoshi Saeki, Katsuyoshi Mitsunaga, Miyuki Koshikawa, Hiroe Takeuchi, Kazuo Koike, Triterpenoid Saponin from Platycodon grandiflorum Natural medicines = 生薬學雜誌. ,vol. 54, pp. 148- 150 ,(2000)
Sun YuMing, Wang Qing, Zhang Qing, Study on percutaneous absorption and synergistic penetration enhancement effect of aconitine, ginsenoside Rg1 and tetrahydropalmatine. Chinese Journal of Information on Traditional Chinese Medicine. ,vol. 16, pp. 36- 39 ,(2009)
Jian Liu, Jianfen Fan, Min Tang, Min Cen, Jianfeng Yan, Zhao Liu, Weiqun Zhou, Water Diffusion Behaviors and Transportation Properties in Transmembrane Cyclic Hexa-, Octa- and Decapeptide Nanotubes Journal of Physical Chemistry B. ,vol. 114, pp. 12183- 12192 ,(2010) , 10.1021/JP1039207
Lu Xinzheng, Yang Ning, Jiang Jianjing, Application of computer simulation technology for structure analysis in disaster Automation in Construction. ,vol. 13, pp. 597- 606 ,(2004) , 10.1016/J.AUTCON.2004.04.002
R Pignatello, T Musumeci, L Basile, C Carbone, G Puglisi, Biomembrane models and drug-biomembrane interaction studies: Involvement in drug design and development Journal of Pharmacy and Bioallied Sciences. ,vol. 3, pp. 4- 14 ,(2011) , 10.4103/0975-7406.76461
Hai Lin Zhao, Kyung-Hyun Cho, Young Wan Ha, Tae-Sook Jeong, Woo Song Lee, Yeong Shik Kim, Cholesterol-lowering effect of platycodin D in hypercholesterolemic ICR mice. European Journal of Pharmacology. ,vol. 537, pp. 166- 173 ,(2006) , 10.1016/J.EJPHAR.2006.03.032
J. M. Haile, Ian Johnston, A. John Mallinckrodt, Susan McKay, Molecular Dynamics Simulation: Elementary Methods Computers in Physics. ,vol. 7, pp. 625- 625 ,(1993) , 10.1063/1.4823234
Alan E. Mark, Siewert J. Marrink, Alex H. de Vries, Coarse grained model for semiquantitative lipid simulations Journal of Physical Chemistry B. ,vol. 108, pp. 750- 760 ,(2004) , 10.1021/JP036508G