Potential clinical significance of plasma-based KRAS mutation analysis using the COLD-PCR/TaqMan®-MGB probe genotyping method

作者: PEIJIA LIU , HONGYAN LIANG , LI XUE , CHUN YANG , YANG LIU

DOI: 10.3892/ETM.2012.566

关键词:

摘要: Despite the improved ability to detect mutations in recent years, tissue specimens cannot always be procured a clinical setting, particularly from patients with recurrence of tumors or metastasis. Therefore, aim this study was investigate whether plasma is able used for mutation analysis instead specimens. We collected 62 colorectal cancer (CRC) prior treatment. DNA extracted and matched tumor tissues were obtained. Mutations KRAS amplified sequenced by regular polymerase chain reaction (PCR) co-amplification at lower denaturation temperature (COLD)-PCR. Plasma gene on codon 12 (GGT>GAT) detected using nested COLD-PCR/TaqMan® -MGB probe. compared. found 13 (21.0%) (19.4%) tissues. The consistency between 75% (9/12), which indicated high correlation corresponding (P<0.001; index, k=0.649). Notably, four (6.5%) had no detectable primary tumors, three (4.8%) samples. Thus, correlate status CRC. Our provides evidence suggest that may as potential medium CRC COLD-PCR/TaqMan-MGB probe method.

参考文章(19)
Jennifer S Lin, Elizabeth M Webber, Caitlyn A Senger, Rebecca S Holmes, Evelyn P Whitlock, Systematic review of pharmacogenetic testing for predicting clinical benefit to anti-EGFR therapy in metastatic colorectal cancer American Journal of Cancer Research. ,vol. 1, pp. 650- 662 ,(2011)
Colin C Pritchard, Laura Akagi, Poluru L Reddy, Loren Joseph, Jonathan F Tait, COLD-PCR enhanced melting curve analysis improves diagnostic accuracy for KRAS mutations in colorectal carcinoma BMC Clinical Pathology. ,vol. 10, pp. 6- 6 ,(2010) , 10.1186/1472-6890-10-6
Zhuang Zuo, Su S Chen, Pranil K Chandra, John M Galbincea, Matthew Soape, Steven Doan, Bedia A Barkoh, Hartmut Koeppen, L Jeffrey Medeiros, Rajyalakshmi Luthra, Application of COLD-PCR for improved detection of KRAS mutations in clinical samples Modern Pathology. ,vol. 22, pp. 1023- 1031 ,(2009) , 10.1038/MODPATHOL.2009.59
Eric Raymond, Sandrine Faivre, Jean Pierre Armand, Epidermal growth factor receptor tyrosine kinase as a target for anticancer therapy. Drugs. ,vol. 60, pp. 15- 23 ,(2000) , 10.2165/00003495-200060001-00002
L. Boni, E. Cassinotti, M. Canziani, G. Dionigi, F. Rovera, R. Dionigi, Free circulating DNA as possible tumour marker in colorectal cancer. Surgical Oncology-oxford. ,vol. 16, pp. 29- 31 ,(2007) , 10.1016/J.SURONC.2007.10.004
Philip C. Mack, William S. Holland, Rebekah A. Burich, Randeep Sangha, Leslie J. Solis, Yueju Li, Laurel A. Beckett, Primo N. Lara, Angela M. Davies, David R. Gandara, EGFR mutations detected in plasma are associated with patient outcomes in erlotinib plus docetaxel-treated non-small cell lung cancer. Journal of Thoracic Oncology. ,vol. 4, pp. 1466- 1472 ,(2009) , 10.1097/JTO.0B013E3181BBF239
Coren A Milbury, Jin Li, Pingfang Liu, G Mike Makrigiorgos, COLD-PCR: improving the sensitivity of molecular diagnostics assays Expert Review of Molecular Diagnostics. ,vol. 11, pp. 159- 169 ,(2011) , 10.1586/ERM.10.115
S. Wang, T. An, J. Wang, J. Zhao, Z. Wang, M. Zhuo, H. Bai, L. Yang, Y. Zhang, X. Wang, J. Duan, Y. Wang, Q. Guo, M. Wu, Potential Clinical Significance of a Plasma-Based KRAS Mutation Analysis in Patients with Advanced Non–Small Cell Lung Cancer Clinical Cancer Research. ,vol. 16, pp. 1324- 1330 ,(2010) , 10.1158/1078-0432.CCR-09-2672
Jin Li, Lilin Wang, Harvey Mamon, Matthew H Kulke, Ross Berbeco, G Mike Makrigiorgos, Replacing PCR with COLD-PCR enriches variant DNA sequences and redefines the sensitivity of genetic testing. Nature Medicine. ,vol. 14, pp. 579- 584 ,(2008) , 10.1038/NM1708