Two-round coamplification at lower denaturation temperature-PCR (COLD-PCR)-based sanger sequencing identifies a novel spectrum of low-level mutations in lung adenocarcinoma.

作者: Jin Li , Coren A. Milbury , Cheng Li , G. Mike Makrigiorgos

DOI: 10.1002/HUMU.21112

关键词: ExonGeneticsCOLD-PCRMissense mutationSanger sequencingBiologyPolymerase chain reactionGenetic heterogeneityDNA Mutational AnalysisFrameshift mutation

摘要: … and sequencing of low-level TP53 mutations abundant at as … fast COLD-PCR followed by Sanger sequencing. We used this … also has limitations as it was designed to maximize mutation …

参考文章(41)
Joan H. Schiller, Sudeshna Adak, Richard H. Feins, Steven M. Keller, Willard A. Fry, Robert B. Livingston, M. Elizabeth M. Hammond, Barbara Wolf, Linda Sabatini, James Jett, Leslie Kohman, David H. Johnson, Lack of Prognostic Significance of p53 and K-ras Mutations in Primary Resected Non–Small-Cell Lung Cancer on E4592: A Laboratory Ancillary Study on an Eastern Cooperative Oncology Group Prospective Randomized Trial of Postoperative Adjuvant Therapy Journal of Clinical Oncology. ,vol. 19, pp. 448- 457 ,(2001) , 10.1200/JCO.2001.19.2.448
Jin Li, G. Mike Makrigiorgos, COLD-PCR: a new platform for highly improved mutation detection in cancer and genetic testing Biochemical Society Transactions. ,vol. 37, pp. 427- 432 ,(2009) , 10.1042/BST0370427
William D. Foulkes, p53--master and commander. The New England Journal of Medicine. ,vol. 357, pp. 2539- 2541 ,(2007) , 10.1056/NEJMP0707422
Cheng Li, Rameen Beroukhim, Barbara A Weir, Wendy Winckler, Levi A Garraway, William R Sellers, Matthew Meyerson, None, Major copy proportion analysis of tumor samples using SNP arrays BMC Bioinformatics. ,vol. 9, pp. 204- 204 ,(2008) , 10.1186/1471-2105-9-204
Shunsuke Kato, Shuang-Yin Han, Wen Liu, Kazunori Otsuka, Hiroyuki Shibata, Ryunosuke Kanamaru, Chikashi Ishioka, None, Understanding the function–structure and function–mutation relationships of p53 tumor suppressor protein by high-resolution missense mutation analysis Proceedings of the National Academy of Sciences of the United States of America. ,vol. 100, pp. 8424- 8429 ,(2003) , 10.1073/PNAS.1431692100
Clifton F. Mountain, Revisions in the International System for Staging Lung Cancer Chest. ,vol. 111, pp. 1710- 1717 ,(1997) , 10.1378/CHEST.111.6.1710
Zhenbin Chen, Jinong Feng, Carolyn H. Buzin, Steve S. Sommer, Epidemiology of Doublet/Multiplet Mutations in Lung Cancers: Evidence that a Subset Arises by Chronocoordinate Events PLoS ONE. ,vol. 3, pp. e3714- ,(2008) , 10.1371/JOURNAL.PONE.0003714
Roy Bastien, Tracey B. Lewis, Jason E. Hawkes, John F. Quackenbush, Thomas C. Robbins, Juan Palazzo, Charles M. Perou, Philip S. Bernard, High-throughput amplicon scanning of the TP53 gene in breast cancer using high-resolution fluorescent melting curve analyses and automatic mutation calling. Human Mutation. ,vol. 29, pp. 757- 764 ,(2008) , 10.1002/HUMU.20726
T Takahashi, M. Nau, I Chiba, M. Birrer, R. Rosenberg, M Vinocour, M Levitt, H Pass, A. Gazdar, J. Minna, p53: a frequent target for genetic abnormalities in lung cancer Science. ,vol. 246, pp. 491- 494 ,(1989) , 10.1126/SCIENCE.2554494